CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36172	Soybean	nucleus	92.77	85.64
VIT_10s0071g00860.t01	Wine grape	extracellular, vacuole	64.38	60.24
PGSC0003DMT400065091	Potato	extracellular	60.4	56.32
Solyc04g008830.1.1	Tomato	nucleus	60.22	56.16
GSMUA_Achr1P06920_001	Banana	plastid	22.78	56.0
Bra026499.1-P	Field mustard	plastid	49.73	55.56
CDY16850	Canola	plastid	49.37	55.15
CDX88024	Canola	extracellular, vacuole	58.05	54.68
Bra009680.1-P	Field mustard	extracellular, vacuole	57.87	54.51
AT5G23400.1	Thale cress	vacuole	58.05	54.5
CDX80361	Canola	extracellular, vacuole	57.69	54.34
CDY64876	Canola	extracellular, vacuole	56.6	53.69
TraesCS2A01G593600.1	Wheat	endoplasmic reticulum, extracellular	37.97	46.98
TraesCS2D01G561100.1	Wheat	extracellular	37.25	46.5
TraesCS2B01G590900.1	Wheat	extracellular	37.25	46.09
Os04t0677200-01	Rice	cytosol, peroxisome	35.62	45.08
Zm00001d026617_P001	Maize	extracellular	41.77	44.77
KXG27431	Sorghum	vacuole	42.31	44.66
HORVU2Hr1G119550.1	Barley	cytosol	24.95	39.32
KRH20845	Soybean	endoplasmic reticulum	23.69	35.79
KRH43480	Soybean	nucleus	23.15	35.75
KRH27500	Soybean	endoplasmic reticulum, extracellular	23.51	35.62
KRH23157	Soybean	nucleus	22.97	34.51
KRH24681	Soybean	extracellular	21.88	34.08
KRH56365	Soybean	cytosol	9.76	32.73
KRH08128	Soybean	cytosol	35.99	32.46
KRH12883	Soybean	cytosol	9.22	32.08
KRH24680	Soybean	extracellular	21.16	32.05
KRH56366	Soybean	nucleus	28.03	31.7
KRG95348	Soybean	mitochondrion	20.07	31.62
KRH58374	Soybean	endoplasmic reticulum	18.63	30.75
KRH29680	Soybean	endoplasmic reticulum	21.34	30.49
KRH74736	Soybean	endoplasmic reticulum, extracellular, plasma membrane	34.9	30.25
KRH45818	Soybean	plasma membrane	35.08	30.12
KRH42258	Soybean	extracellular	18.08	30.12
KRH12977	Soybean	nucleus	18.44	30.09
KRH42259	Soybean	extracellular	18.08	30.03
KRH12976	Soybean	cytosol	20.07	29.84
KRH58377	Soybean	endoplasmic reticulum	17.9	29.64
KRH58376	Soybean	endoplasmic reticulum	17.72	29.17
KRH42256	Soybean	endoplasmic reticulum	17.18	28.27
KRG91824	Soybean	extracellular	11.93	27.5
KRH42255	Soybean	cytosol, extracellular, mitochondrion, plastid	6.15	24.11
KRH58375	Soybean	extracellular, plastid	9.95	23.31

Protein Annotations

EntrezGene:100305369	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02012626	UniProt:C6FF80	EMBL:EU888332
EnsemblPlantsGene:GLYMA_20G100500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675
EnsemblPlants:KRG90583	ProteinID:KRG90583	ProteinID:KRG90583.1	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF08263	PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR43887	PANTHER:PTHR43887:SF24
SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI0001AAAB8C	SEG:seg	:

Description

hypothetical protein

Coordinates

chr20:+:34387670..34389477

Molecular Weight (calculated)

60420.8 Da

IEP (calculated)

7.270

GRAVY (calculated)

-0.006

Length

553 amino acids

Sequence
(BLAST)

001: MQLGKWVVDL VLIFSLLSQF SETVAETSSY STPQPQPPIC SEEDRASLLS FKASISQDTT ETLSTWTGRD CCDGGWEGVE CNPSTGRVNV LQIQRPGRDA
101: DATYMKGTLS PSLGNLHFLE SLSLSGNHLK GQIPPTLGGL RNLAQLNLAR NSLTGPIPLS FKTLINLQYL DLSHNLLSSP IPDFVGDFKN LTYLDLSSNL
201: LTGKIPVSLF SLVNLLDLSL SYNKFAGNIP DQVGNLKSLT SLQLSGNLLT GHIPLSISRL QNLWYLNISR NCLSDPLPAI PTKGIPSLLS IDLSYNNLSL
301: GILPDWIRSK QLKDVHLAGC KLKGDLPHFT RPDSLSSIDL SDNYLVDGIS NFFTNMSSLQ KVKLSNNQLR FDISEIKLPT ELSSIDLHAN LLVGSLSTII
401: NDRTSSSLEV IDVSNNFISG HIPEFVEGSS LKVLNLGSNN ISGSIPISIS NLINLERLDI SRNHILGTIP SSLGQLLKLL WLDVSINGLT GQIPSSLSQI
501: TGLKHANFRA NRLCGEIPQS RPFNIFRPVA YIHNLCLCGK PLQPCKKQWS MGQ

Best Arabidopsis Sequence Match ( AT5G23400.1 )
(BLAST)

001: MQNLKWVLMN LLFVSALVRN FVLSSSQQVI CSSQDRATLL GFKSSIIEDT TGVLDSWVGK DCCNGDWEGV QCNPATGKVT GLVLQSAVNE PTLYMKGTLS
101: PSLGNLRSLE LLLITGNKFI TGSIPNSFSN LTSLRQLILD DNSLQGNVLS SLGHLPLLEI LSLAGNRFSG LVPASFGSLR RLTTMNLARN SFSGPIPVTF
201: KNLLKLENLD LSSNLLSGPI PDFIGQFQNL TNLYLSSNRF SGVLPVSVYS LRKLQTMSLE RNGLTGPLSD RFSYLKSLTS LQLSGNKFIG HIPASITGLQ
301: NLWSLNLSRN LFSDPLPVVG ARGFPSLLSI DLSYNNLNLG AIPSWIRDKQ LSDINLAGCK LRGTFPKLTR PTTLTSLDLS DNFLTGDVSA FLTSLTNVQK
401: VKLSKNQLRF DLSKLKLPEG VASIDLSSNL VTGSLSSLIN NKTSSFLEEI HLTNNQISGR IPDFGESLNL KVLNIGSNKI SGQIPSSISN LVELVRLDIS
501: RNHITGGIPQ AIGQLAQLKW LDLSINALTG RIPDSLLNIK TIKHASFRAN RLCGQIPQGR PFNIFPAAAY LHNLCLCGKP LPACRKTMK

Arabidopsis Description

Disease resistance protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FHL8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.