CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057136	Potato	extracellular	58.97	63.11
Bra009234.1-P	Field mustard	extracellular	58.4	61.93
Solyc07g065090.1.1	Tomato	extracellular	57.55	61.77
CDX70060	Canola	extracellular	58.4	61.75
KRH12977	Soybean	nucleus	59.54	61.65
VIT_08s0007g07690.t01	Wine grape	extracellular	60.4	61.63
AT5G06860.1	Thale cress	extracellular	57.83	61.52
CDX98965	Canola	extracellular	58.12	61.45
AT5G06870.1	Thale cress	extracellular	55.84	59.39
CDX70058	Canola	extracellular	56.41	59.28
KRH12976	Soybean	cytosol	62.39	58.87
Bra005918.1-P	Field mustard	extracellular	33.9	58.05
Bra009236.1-P	Field mustard	extracellular	54.99	57.78
CDY58887	Canola	extracellular	54.13	57.58
CDY58884	Canola	extracellular	54.13	57.4
CDX70057	Canola	extracellular	54.7	57.14
CDX98967	Canola	extracellular	54.7	57.14
Bra009237.1-P	Field mustard	extracellular	54.7	57.14
Bra005919.1-P	Field mustard	extracellular	53.85	57.1
CDX70059	Canola	extracellular	54.13	56.89
Bra009235.1-P	Field mustard	extracellular	54.13	56.89
CDX98966	Canola	extracellular	54.13	56.89
Bra009238.1-P	Field mustard	extracellular	52.42	55.42
Bra005916.1-P	Field mustard	extracellular	54.42	55.04
CDY58889	Canola	extracellular	54.13	54.76
CDY58888	Canola	extracellular	53.28	54.68
Bra005917.1-P	Field mustard	extracellular	53.28	54.68
CDX81023	Canola	extracellular	52.71	54.09
TraesCS3A01G459300.1	Wheat	cytosol	22.22	52.7
KRH42258	Soybean	extracellular	49.0	51.81
KRH58376	Soybean	endoplasmic reticulum	47.01	49.11
KRH42256	Soybean	endoplasmic reticulum	46.72	48.81
KRH58377	Soybean	endoplasmic reticulum	46.44	48.8
KRH58374	Soybean	endoplasmic reticulum	46.44	48.66
TraesCS3D01G451900.1	Wheat	extracellular	46.72	48.38
TraesCS1D01G010800.1	Wheat	extracellular	46.44	48.37
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	52.99	48.31
KRH42259	Soybean	extracellular	45.58	48.05
GSMUA_Achr9P12430_001	Banana	extracellular	41.31	48.01
TraesCS3A01G459200.1	Wheat	extracellular	46.44	47.94
TraesCS1A01G012600.1	Wheat	extracellular	45.87	47.92
TraesCS3D01G451800.1	Wheat	extracellular	46.15	47.65
TraesCS3B01G498900.1	Wheat	extracellular	45.87	47.35
TraesCS7D01G200000.1	Wheat	cytosol	41.88	46.96
TraesCS1B01G017300.1	Wheat	extracellular	45.01	46.88
Zm00001d035753_P001	Maize	extracellular	45.3	46.63
EES17528	Sorghum	extracellular	45.01	46.61
EES17529	Sorghum	extracellular	44.73	46.04
TraesCS3D01G451400.1	Wheat	extracellular	44.44	46.02
TraesCS3A01G459000.1	Wheat	extracellular	44.44	45.75
TraesCS3D01G451500.1	Wheat	extracellular	43.3	45.51
CDX70056	Canola	extracellular	52.42	45.43
Os05t0104150-01	Rice	extracellular	44.16	45.32
Os05t0104200-01	Rice	extracellular	39.89	45.31
HORVU3Hr1G098610.1	Barley	extracellular	43.3	45.24
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	45.87	45.1
TraesCS7B01G103900.1	Wheat	extracellular	42.17	43.92
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	45.58	43.48
Zm00001d035756_P001	Maize	vacuole	42.73	42.86
TraesCS2A01G470500.1	Wheat	extracellular	39.6	40.64
KRH42255	Soybean	cytosol, extracellular, mitochondrion, plastid	16.24	40.43
TraesCS2D01G470400.1	Wheat	extracellular	39.32	40.35
HORVU2Hr1G106620.1	Barley	extracellular	38.46	39.71
Os05t0104600-01	Rice	extracellular	38.18	39.53
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	38.46	39.47
KRH58375	Soybean	extracellular, plastid	26.5	39.41
TraesCS2B01G493300.1	Wheat	extracellular	38.18	38.84
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	37.89	38.78
TraesCS2A01G470600.1	Wheat	extracellular	37.04	38.46
EES17527	Sorghum	extracellular, plastid	43.02	38.42
Os05t0104700-01	Rice	extracellular	41.03	35.91
TraesCS7A01G197500.1	Wheat	extracellular	17.95	34.43
CDX81022	Canola	extracellular, plasma membrane	47.86	33.2
KRH27500	Soybean	endoplasmic reticulum, extracellular	29.63	28.49
KRH24680	Soybean	extracellular	29.34	28.22
KRH23157	Soybean	nucleus	29.34	27.99
KRH24681	Soybean	extracellular	27.92	27.61
KRH43480	Soybean	nucleus	27.92	27.37
KRH20845	Soybean	endoplasmic reticulum	28.49	27.32
KRH12883	Soybean	cytosol	12.25	27.04
KRH29680	Soybean	endoplasmic reticulum	28.49	25.84
KRG91824	Soybean	extracellular	15.67	22.92
KRH56366	Soybean	nucleus	29.91	21.47
KRG90583	Soybean	extracellular	31.62	20.07
KRH36172	Soybean	nucleus	33.62	19.7
KRH56365	Soybean	cytosol	8.55	18.18
KRH08128	Soybean	cytosol	30.48	17.46
KRH74736	Soybean	endoplasmic reticulum, extracellular, plasma membrane	31.34	17.24
KRH45818	Soybean	plasma membrane	30.2	16.46

Protein Annotations

MapMan:26.8.3.4	Gene3D:3.80.10.10	UniProt:A0A0R0EYN3	EMBL:ACUP02012102	EnsemblPlantsGene:GLYMA_19G145200	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	EnsemblPlants:KRG95348	ProteinID:KRG95348
ProteinID:KRG95348.1	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF08263	PFAM:PF13516
PFAM:PF13855	PANTHER:PTHR44138	SUPFAM:SSF52058	TMHMM:TMhelix	UniParc:UPI0003DEA734	SEG:seg

Description

hypothetical protein

Coordinates

chr19:-:40598861..40600292

Molecular Weight (calculated)

39160.4 Da

IEP (calculated)

8.732

GRAVY (calculated)

-0.078

Length

351 amino acids

Sequence
(BLAST)

001: MMYPTACYKF QRSLTHSKMV TMYGIWCFIT VLLFSPVAFS ELCNPQDKKV LLQIKKDFNN PYLLASWNPN TDCCNWYCVQ CHPETHRINS LVILSSVPQT
101: NLSGPIPPSV GDLPFLETLQ FHKLPKLTGP IQPTIAKLTK LKEIYISWTN VSGPVPDFLA RLTNLQFLDL SFNNLSGPIP SSLSQLSNLV SLRLDRNRLT
201: GPIPESFGSF KKPGPSLWLS HNQLSGPIPA SLANIDPQRI DFSRNKLEGD ASVLFGRNKT TQIVDVSRNS LAFDLSKVEF PTSLISLDLN HNQITGSIPV
301: GLTAVDFLQG FNVSYNRLCG EIPQGGRLQK FDVYSYFHNK CLCGSPLTSC K

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.