Factsheet for Zm00001d035753_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 16602704
extracellular: 18088330

msms PMID: 18088330 doi

S Alvarez, EL Marsh, SG Schroeder, DP Schachtman

Donald Danforth Plant Science Center, 975 North Warson Rd, St Louis, MO, 63132, USA.

msms PMID: 16602704 doi

S Alvarez, JQ Goodger, EL Marsh, S Chen, VS Asirvatham, DP Schachtman

Donald Danforth Plant Science Center, 975 North Warson Road, Saint Louis, Missouri 63132, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17529	Sorghum	extracellular	88.86	88.86
Os05t0104200-01	Rice	extracellular	61.88	68.28
Zm00001d035756_P001	Maize	vacuole	63.05	61.43
Bra005918.1-P	Field mustard	extracellular	29.91	49.76
GSMUA_Achr9P12430_001	Banana	extracellular	43.4	49.01
CDX70058	Canola	extracellular	46.63	47.6
CDX70057	Canola	extracellular	46.63	47.32
Bra009237.1-P	Field mustard	extracellular	46.63	47.32
Bra009236.1-P	Field mustard	extracellular	46.33	47.31
CDX98967	Canola	extracellular	46.04	46.73
CDX98965	Canola	extracellular	45.45	46.69
Bra009234.1-P	Field mustard	extracellular	45.16	46.53
CDX98966	Canola	extracellular	45.45	46.41
CDX70060	Canola	extracellular	45.16	46.39
CDY58887	Canola	extracellular	44.87	46.36
Bra009235.1-P	Field mustard	extracellular	45.16	46.11
CDX70059	Canola	extracellular	45.16	46.11
AT5G06860.1	Thale cress	extracellular	44.57	46.06
CDY58884	Canola	extracellular	44.57	45.92
Bra005919.1-P	Field mustard	extracellular	44.28	45.62
KRG95348	Soybean	mitochondrion	46.63	45.3
AT5G06870.1	Thale cress	extracellular	43.7	45.15
VIT_13s0064g01370.t01	Wine grape	extracellular	43.4	44.58
Bra009238.1-P	Field mustard	extracellular	43.4	44.58
Bra005917.1-P	Field mustard	extracellular	44.28	44.15
CDY58888	Canola	extracellular	43.99	43.86
CDX81023	Canola	extracellular	43.7	43.57
KRH12977	Soybean	nucleus	42.82	43.07
Solyc09g014590.2.1	Tomato	extracellular	39.3	42.95
Solyc09g014480.1.1	Tomato	extracellular	41.64	42.39
Bra005916.1-P	Field mustard	extracellular	43.11	42.36
Zm00001d029583_P001	Maize	extracellular	35.19	42.25
PGSC0003DMT400021883	Potato	extracellular	41.35	42.22
Zm00001d021836_P001	Maize	extracellular	41.06	42.17
CDY58889	Canola	extracellular	42.52	41.79
Zm00001d006623_P001	Maize	extracellular	40.47	41.69
Zm00001d052892_P001	Maize	endoplasmic reticulum, extracellular	28.15	40.0
KRH12976	Soybean	cytosol	43.11	39.52
Zm00001d020944_P001	Maize	extracellular	38.71	38.71
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	43.7	38.7
Zm00001d003317_P001	Maize	extracellular	37.54	38.1
CDX70056	Canola	extracellular	43.4	36.54
Zm00001d031434_P001	Maize	extracellular	33.43	29.92
CDX81022	Canola	extracellular, plasma membrane	37.24	25.1
Zm00001d026617_P001	Maize	extracellular	29.62	19.57

Protein Annotations

EnsemblPlants:Zm00001d035753_P001	EnsemblPlants:Zm00001d035753_T001	EnsemblPlantsGene:Zm00001d035753	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	PANTHER:PTHR44138	PFAM:PF08263	PRINTS:PR00019	ProteinID:AQK79617.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52058	UniParc:UPI000220C3DE	UniProt:A0A1D6LII8	MapMan:26.8.3.4	:

Description

Polygalacturonase inhibitor

Coordinates

chr6:-:45385591..45386616

Molecular Weight (calculated)

36039.1 Da

IEP (calculated)

7.175

GRAVY (calculated)

0.163

Length

341 amino acids

Sequence
(BLAST)

001: MKTTTTAMRS LSVAVLLLVA AAASASAAKD RCHSGDKAAL LAIKAALGNP YHFASWTPDN PCCDWYDVDC DATTGRVVGL AVFQDANLTG TIPDAVAGLV
101: HLQNLMLHHL PGISGPIPPA IGRLSNLSFL TISWTGVSGP VPSFLGTLTR LNQLDLSFNA LTGAVPASLA ALPSLYSIDI SRNRLTGSLP PLLFSRLDKA
201: QQEAYLRLSH NNLTGSVPPE FSAVAFAQVD LSRNAFAGDA SGLFGRAKPV QQMDLSRNAF SFNLSAVELP EQLNSLDLSH NAIYGGIPAQ VVNLTNLQLF
301: NVSYNRLCGA VPTGGNMASF DAYSYQHNRC LCGPPLADPC K

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.