Factsheet for Zm00001d020944_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99094	Sorghum	mitochondrion, vacuole	89.74	87.18
TraesCS5A01G266200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	66.28	71.29
Os09t0491612-01	Rice	extracellular	68.04	67.84
TraesCS5B01G265900.1	Wheat	extracellular	70.09	67.71
HORVU5Hr1G073500.1	Barley	extracellular, vacuole	68.92	67.14
Zm00001d052892_P001	Maize	endoplasmic reticulum, extracellular	41.94	59.58
GSMUA_Achr6P22250_001	Banana	extracellular	54.55	56.71
Zm00001d006623_P001	Maize	extracellular	43.99	45.32
Zm00001d021836_P001	Maize	extracellular	43.7	44.88
Zm00001d003317_P001	Maize	extracellular	42.52	43.15
Zm00001d029583_P001	Maize	extracellular	33.72	40.49
Zm00001d035753_P001	Maize	extracellular	38.71	38.71
Zm00001d035756_P001	Maize	vacuole	39.0	38.0
Zm00001d031434_P001	Maize	extracellular	34.02	30.45
Zm00001d026617_P001	Maize	extracellular	34.31	22.67

Protein Annotations

MapMan:26.8.3.4	Gene3D:3.80.10.10	UniProt:A0A1D6I769	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	ProteinID:ONM55913.1
PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	PANTHER:PTHR44138	PANTHER:PTHR44138:SF2	SUPFAM:SSF52058
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00084551FE	EnsemblPlantsGene:Zm00001d020944	EnsemblPlants:Zm00001d020944_P001	EnsemblPlants:Zm00001d020944_T001
SEG:seg	:	:	:	:	:

Description

Leucine-rich repeat (LRR) family protein

Coordinates

chr7:-:137377035..137378060

Molecular Weight (calculated)

36281.8 Da

IEP (calculated)

5.088

GRAVY (calculated)

0.232

Length

341 amino acids

Sequence
(BLAST)

001: MSSSPSLICC SMSLGLLSLL LLLFSACYTA PTYATDCDPA DRAALLRVKA QLGDPAQLSS WLPSTNCCAW DPAVFCNAAG RVTGLALYAL PDVSARVPPA
101: LGDLAALEIL QVDSVPGLAG PVPASFANLT RLLDLDINGT SISGPIPGCL LAAAVNLRTL VIANSKLAGP IPSSLAALPG LRYLDLSGNM LSGAIPPELL
201: HGSSRFLILS NNRLTGEIPG EYGDGDVDTI DLSHNQLTGD PSSFLFGITK PAVKIDLSWN QLEFDLTEVR FPHHLRFLDL SHNRVRGRVA KSLMDVRLDH
301: FDVSYNELCG ELPAGRFMSM HEAECYAHNK CLCGTPLPPC N

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.