Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU81782 | Sorghum | extracellular | 88.1 | 86.05 |
| HORVU2Hr1G082160.1 | Barley | cytosol | 57.74 | 62.38 |
| TraesCS2B01G353300.1 | Wheat | extracellular | 60.71 | 62.2 |
| HORVU2Hr1G082140.1 | Barley | extracellular | 60.42 | 61.7 |
| Zm00001d020944_P001 | Maize | extracellular | 43.15 | 42.52 |
| Zm00001d035753_P001 | Maize | extracellular | 38.1 | 37.54 |
| Zm00001d052892_P001 | Maize | endoplasmic reticulum, extracellular | 26.79 | 37.5 |
| Zm00001d021836_P001 | Maize | extracellular | 36.61 | 37.05 |
| Zm00001d029583_P001 | Maize | extracellular | 31.25 | 36.97 |
| Zm00001d006623_P001 | Maize | extracellular | 36.31 | 36.86 |
| Zm00001d035756_P001 | Maize | vacuole | 38.39 | 36.86 |
| Zm00001d031434_P001 | Maize | extracellular | 30.95 | 27.3 |
| Zm00001d026617_P001 | Maize | extracellular | 28.87 | 18.8 |
Protein Annotations
| EnsemblPlants:Zm00001d003317_P001 | EnsemblPlants:Zm00001d003317_T001 | EnsemblPlantsGene:Zm00001d003317 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| PANTHER:PTHR44138 | PANTHER:PTHR44138:SF3 | ProteinID:ONM16734.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52058 |
| TMHMM:TMhelix | UniParc:UPI000221F7E9 | UniProt:A0A1D6E8I8 | MapMan:35.1 | : | : |
Description
Leucine-rich repeat (LRR) family protein
Coordinates
chr2:+:39906034..39907044
Molecular Weight (calculated)
36832.0 Da
IEP (calculated)
9.127
GRAVY (calculated)
0.083
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNTAALLL LLLLSFQLIA MSLSQTQLST QDLPALIKIR QQLGNPDALA GWRPDSLCWG WWPAACNEQG RVTKLFLERL NITSTLPPAI GELDQLETLS
101: IIEMPGLGGR IPDSFCNLRH LSLFNLMVTS VSGPIPACLS RTNLTSASFF RSKLNGIIPG SLWKLPYFTY FNAAYNNLVG PIPPLLVHGG TPDRPLGLML
201: DGNRLSGPIP WTFALERHLL QFRVANNKLT GDPSFLFGRR KTVTGTIDLS GNNFRFNLTG VEMPMQLSFL NLSHNRIYGG VPVSLRDTRV AVLDLSYNDL
301: CGKIPTGGHM VQFKAAAYEH NKCLCGTPLP PCANGR
101: IIEMPGLGGR IPDSFCNLRH LSLFNLMVTS VSGPIPACLS RTNLTSASFF RSKLNGIIPG SLWKLPYFTY FNAAYNNLVG PIPPLLVHGG TPDRPLGLML
201: DGNRLSGPIP WTFALERHLL QFRVANNKLT GDPSFLFGRR KTVTGTIDLS GNNFRFNLTG VEMPMQLSFL NLSHNRIYGG VPVSLRDTRV AVLDLSYNDL
301: CGKIPTGGHM VQFKAAAYEH NKCLCGTPLP PCANGR
001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
Arabidopsis Description
FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.