Factsheet for Zm00001d035756_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17527	Sorghum	extracellular, plastid	83.71	74.55
TraesCS1A01G012600.1	Wheat	extracellular	63.14	65.77
TraesCS1D01G010800.1	Wheat	extracellular	62.86	65.28
TraesCS1B01G017300.1	Wheat	extracellular	61.14	63.5
Zm00001d035753_P001	Maize	extracellular	61.43	63.05
Os05t0104150-01	Rice	extracellular	59.71	61.11
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	62.0	58.97
CDX70058	Canola	extracellular	44.29	46.41
Bra009236.1-P	Field mustard	extracellular	44.0	46.11
Bra009237.1-P	Field mustard	extracellular	43.71	45.54
CDX70057	Canola	extracellular	43.71	45.54
AT5G06860.1	Thale cress	extracellular	42.86	45.45
Bra005918.1-P	Field mustard	extracellular	26.57	45.37
Bra009234.1-P	Field mustard	extracellular	42.86	45.32
CDX70060	Canola	extracellular	42.86	45.18
CDX98966	Canola	extracellular	42.57	44.61
CDX98965	Canola	extracellular	42.29	44.58
CDX98967	Canola	extracellular	42.57	44.35
CDX70059	Canola	extracellular	42.29	44.31
GSMUA_Achr9P12430_001	Banana	extracellular	38.0	44.04
Bra009235.1-P	Field mustard	extracellular	42.0	44.01
AT5G06870.1	Thale cress	extracellular	40.86	43.33
CDY58887	Canola	extracellular	40.57	43.03
KRG95348	Soybean	mitochondrion	42.86	42.73
CDY58884	Canola	extracellular	40.29	42.6
Bra005919.1-P	Field mustard	extracellular	39.71	41.99
VIT_13s0064g01370.t01	Wine grape	extracellular	39.71	41.87
CDY58888	Canola	extracellular	40.86	41.81
Bra005917.1-P	Field mustard	extracellular	40.86	41.81
CDX81023	Canola	extracellular	40.57	41.52
PGSC0003DMT400021883	Potato	extracellular	39.43	41.32
KRH12977	Soybean	nucleus	39.71	41.0
Bra009238.1-P	Field mustard	extracellular	38.86	40.96
Zm00001d029583_P001	Maize	extracellular	33.14	40.85
Zm00001d006623_P001	Maize	extracellular	38.29	40.48
Solyc09g014590.2.1	Tomato	extracellular	36.0	40.38
Solyc09g014480.1.1	Tomato	extracellular	38.57	40.3
Bra005916.1-P	Field mustard	extracellular	39.71	40.06
CDY58889	Canola	extracellular	39.14	39.48
Zm00001d021836_P001	Maize	extracellular	37.43	39.46
Zm00001d052892_P001	Maize	endoplasmic reticulum, extracellular	26.86	39.17
Zm00001d020944_P001	Maize	extracellular	38.0	39.0
Zm00001d003317_P001	Maize	extracellular	36.86	38.39
KRH12976	Soybean	cytosol	40.0	37.63
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	39.43	35.84
CDX70056	Canola	extracellular	38.86	33.58
Zm00001d031434_P001	Maize	extracellular	34.0	31.23
CDX81022	Canola	extracellular, plasma membrane	34.86	24.11
Zm00001d026617_P001	Maize	extracellular	30.86	20.93

Protein Annotations

EntrezGene:103629296	MapMan:26.8.3.4	Gene3D:3.80.10.10	UniProt:A0A1D6LII9	ProteinID:AQK79618.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR44138	SUPFAM:SSF52058
SignalP:SignalP-noTM	UniParc:UPI000220BA0C	EnsemblPlantsGene:Zm00001d035756	EnsemblPlants:Zm00001d035756_P001	EnsemblPlants:Zm00001d035756_T001	SEG:seg

Description

Leucine-rich repeat (LRR) family protein

Coordinates

chr6:-:45647798..45648850

Molecular Weight (calculated)

36973.0 Da

IEP (calculated)

4.857

GRAVY (calculated)

0.202

Length

350 amino acids

Sequence
(BLAST)

001: MAAASSSQQP PRLLVLVAVS CLLLQSAITS SSAESSMQCH EEDQEALLAV NSALGSPYHF ASWTPDTFCC DWYDVDCDNV TGRVVGLTVF GDGNLTGAIP
101: DAIANLTNLR TLVLRHLPGI SGGIPVSLAQ LANLTQLTIS STGVSGPVPS FLSQLTELTL LDLSFNSLDG AIPETLADLP ALSSIDLSRN RLSGPVPPLL
201: LSKYVDDQAA YLMLSHNNLS GSIPAGFASV SFAYLDLSRN AFAGDASGVF GKGKPLQHLD LSRNGFAFSL TAVDLPEQLA YLDLSHNAIR GRIPAQVADL
301: AGLQLFNVSY NKMCGVVPTG GSMAKFDAYS YQHNKCLCGT PLPACGHRYY

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.