Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009236.1-P | Field mustard | extracellular | 97.6 | 97.6 |
| CDX98967 | Canola | extracellular | 89.82 | 89.29 |
| CDX70057 | Canola | extracellular | 89.52 | 88.99 |
| CDX98966 | Canola | extracellular | 84.43 | 84.43 |
| CDX70059 | Canola | extracellular | 84.13 | 84.13 |
| CDX98965 | Canola | extracellular | 79.34 | 79.82 |
| CDX70060 | Canola | extracellular | 77.84 | 78.31 |
| AT5G06860.1 | Thale cress | extracellular | 77.25 | 78.18 |
| CDY58884 | Canola | extracellular | 69.16 | 69.79 |
| CDY58887 | Canola | extracellular | 67.96 | 68.79 |
| CDY58889 | Canola | extracellular | 68.86 | 66.28 |
| CDY58888 | Canola | extracellular | 67.66 | 66.08 |
| CDX81023 | Canola | extracellular | 67.07 | 65.5 |
| CDX98968 | Canola | endoplasmic reticulum, extracellular, vacuole | 70.96 | 61.56 |
| VIT_08s0007g07690.t01 | Wine grape | extracellular | 61.08 | 59.3 |
| CDX70056 | Canola | extracellular | 70.96 | 58.52 |
| Solyc07g065090.1.1 | Tomato | extracellular | 57.19 | 58.41 |
| PGSC0003DMT400057136 | Potato | extracellular | 57.19 | 58.23 |
| KRG95348 | Soybean | mitochondrion | 59.28 | 56.41 |
| TraesCS3A01G459300.1 | Wheat | cytosol | 24.85 | 56.08 |
| KRH12977 | Soybean | nucleus | 55.09 | 54.28 |
| CDY50569 | Canola | extracellular, vacuole | 52.4 | 53.85 |
| CDY52623 | Canola | extracellular, vacuole | 52.1 | 53.54 |
| CDY05006 | Canola | extracellular | 51.2 | 52.78 |
| CDY14065 | Canola | extracellular | 49.7 | 51.23 |
| CDY42127 | Canola | extracellular | 49.7 | 50.92 |
| CDY08451 | Canola | endoplasmic reticulum, extracellular | 49.4 | 50.61 |
| CDY42131 | Canola | extracellular | 47.9 | 49.54 |
| TraesCS3A01G459200.1 | Wheat | extracellular | 50.0 | 49.12 |
| CDY08448 | Canola | extracellular | 47.9 | 48.93 |
| CDY42130 | Canola | extracellular | 47.9 | 48.93 |
| KRH12976 | Soybean | cytosol | 54.49 | 48.92 |
| TraesCS3D01G451800.1 | Wheat | extracellular | 49.7 | 48.82 |
| GSMUA_Achr9P12430_001 | Banana | extracellular | 43.41 | 48.01 |
| CDY08450 | Canola | extracellular | 46.41 | 47.99 |
| TraesCS3B01G498900.1 | Wheat | extracellular | 48.8 | 47.94 |
| TraesCS3D01G451900.1 | Wheat | extracellular | 47.9 | 47.2 |
| TraesCS3D01G451400.1 | Wheat | extracellular | 47.9 | 47.2 |
| HORVU3Hr1G098610.1 | Barley | extracellular | 47.01 | 46.73 |
| Zm00001d035753_P001 | Maize | extracellular | 47.6 | 46.63 |
| CDY42129 | Canola | cytosol | 45.21 | 46.6 |
| HORVU3Hr1G098730.2 | Barley | endoplasmic reticulum, extracellular, mitochondrion | 49.7 | 46.5 |
| TraesCS3A01G459000.1 | Wheat | extracellular | 47.01 | 46.04 |
| TraesCS3D01G451500.1 | Wheat | extracellular | 45.81 | 45.81 |
| EES17529 | Sorghum | extracellular | 46.71 | 45.75 |
| EES17528 | Sorghum | extracellular | 45.51 | 44.84 |
| TraesCS7D01G200000.1 | Wheat | cytosol | 41.62 | 44.41 |
| Os05t0104200-01 | Rice | extracellular | 41.02 | 44.34 |
| Zm00001d035756_P001 | Maize | vacuole | 46.41 | 44.29 |
| Os05t0104150-01 | Rice | extracellular | 44.31 | 43.27 |
| TraesCS1A01G012600.1 | Wheat | extracellular | 43.41 | 43.15 |
| TraesCS1D01G010800.1 | Wheat | extracellular | 43.11 | 42.73 |
| TraesCS7B01G103900.1 | Wheat | extracellular | 42.22 | 41.84 |
| TraesCS1B01G017300.1 | Wheat | extracellular | 41.92 | 41.54 |
| Os05t0104600-01 | Rice | extracellular | 41.92 | 41.3 |
| CDX81022 | Canola | extracellular, plasma membrane | 62.28 | 41.11 |
| TraesCS2A01G470500.1 | Wheat | extracellular | 41.32 | 40.35 |
| TraesCS2D01G470400.1 | Wheat | extracellular | 41.02 | 40.06 |
| TraesCS2D01G470500.1 | Wheat | extracellular, vacuole | 41.02 | 39.94 |
| TraesCS2B01G493300.1 | Wheat | extracellular | 40.72 | 39.42 |
| HORVU2Hr1G106620.1 | Barley | extracellular | 40.12 | 39.41 |
| TraesCS2B01G493200.1 | Wheat | endoplasmic reticulum, extracellular | 40.12 | 39.18 |
| TraesCS2A01G470600.1 | Wheat | extracellular | 39.22 | 38.76 |
| HORVU1Hr1G002410.1 | Barley | endoplasmic reticulum, vacuole | 42.22 | 38.32 |
| EES17527 | Sorghum | extracellular, plastid | 44.61 | 37.91 |
| Os05t0104700-01 | Rice | extracellular | 43.41 | 36.16 |
| TraesCS7A01G197500.1 | Wheat | extracellular | 17.37 | 31.69 |
| CDX85681 | Canola | extracellular | 30.54 | 29.57 |
| CDX91155 | Canola | extracellular | 30.54 | 29.48 |
| CDY52664 | Canola | extracellular | 32.34 | 28.95 |
| CDY19601 | Canola | extracellular | 31.44 | 28.77 |
| CDY60388 | Canola | extracellular | 31.14 | 28.49 |
| CDY50534 | Canola | extracellular, vacuole | 31.74 | 28.42 |
| CDY06385 | Canola | extracellular | 30.84 | 28.22 |
| CDY27559 | Canola | extracellular | 30.54 | 27.95 |
| CDX73812 | Canola | endoplasmic reticulum, extracellular, vacuole | 30.84 | 27.69 |
| CDY00787 | Canola | endoplasmic reticulum, extracellular, vacuole | 30.84 | 27.69 |
| CDY69775 | Canola | extracellular, plasma membrane | 30.24 | 26.79 |
| CDY68308 | Canola | extracellular | 29.94 | 26.74 |
| CDY53975 | Canola | extracellular | 29.64 | 26.54 |
| CDY69275 | Canola | extracellular | 28.74 | 25.67 |
| CDY15279 | Canola | plastid | 27.54 | 21.6 |
| CDY40923 | Canola | extracellular, vacuole | 30.24 | 21.54 |
| CDX93759 | Canola | endoplasmic reticulum, extracellular, vacuole | 10.18 | 20.86 |
| CDX88024 | Canola | extracellular, vacuole | 35.93 | 20.44 |
| CDX80361 | Canola | extracellular, vacuole | 35.93 | 20.44 |
| CDY38783 | Canola | extracellular | 24.85 | 20.24 |
| CDY11623 | Canola | extracellular | 24.55 | 19.62 |
| CDY64876 | Canola | extracellular, vacuole | 33.53 | 19.21 |
| CDY16850 | Canola | plastid | 28.44 | 19.19 |
| CDX93758 | Canola | plastid | 13.77 | 17.9 |
Protein Annotations
| EnsemblPlants:CDX70058 | EnsemblPlantsGene:GSBRNA2T00136158001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PANTHER:PTHR44138 |
| PFAM:PF08263 | PFAM:PF13855 | PFscan:PS51450 | PRINTS:PR00019 | ProteinID:CDX70058 | ProteinID:CDX70058.1 |
| SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52058 | UniParc:UPI0004EDE367 | MapMan:26.8.3.4 | : |
Description
BnaA10g24070D
Coordinates
chrLK031790:-:2909968..2911069
Molecular Weight (calculated)
37337.9 Da
IEP (calculated)
7.734
GRAVY (calculated)
-0.047
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHKTNTTLL FSLLFFITHL SNALSKDLCN ENDKNTLLKI KKSLNNPYHL ASWHPETDCC SWYCLECGDA TVNHRVISLT IFAGQISGQI PPEVGDLPYL
101: QKLVFRKLTN LTGQIPHSIT KLKYLTFLWL SWTNLTGPVP DFLSQLVNLD YLNLSFNELS GSVPSSLSLL PKLTYIDLSR NKLTGTIPES FGSFPGEVPY
201: LILSHNQLSG SIPKSLGNLD FNRIDFSRNK LTGDASMLFG ANKTTFSIDL SRNMFQFDLS RVVLPQSLGV LDLNHNGITG SIPVQWTEYS LQLLNVSYNR
301: LCGPIPTGGS LQRFDSYIYF HNKCLCGAPL DSCK
101: QKLVFRKLTN LTGQIPHSIT KLKYLTFLWL SWTNLTGPVP DFLSQLVNLD YLNLSFNELS GSVPSSLSLL PKLTYIDLSR NKLTGTIPES FGSFPGEVPY
201: LILSHNQLSG SIPKSLGNLD FNRIDFSRNK LTGDASMLFG ANKTTFSIDL SRNMFQFDLS RVVLPQSLGV LDLNHNGITG SIPVQWTEYS LQLLNVSYNR
301: LCGPIPTGGS LQRFDSYIYF HNKCLCGAPL DSCK
001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK
Arabidopsis Description
PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.