Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G451800.1 | Wheat | extracellular | 91.74 | 91.47 |
| TraesCS3B01G498900.1 | Wheat | extracellular | 90.86 | 90.59 |
| TraesCS3A01G459000.1 | Wheat | extracellular | 89.09 | 88.56 |
| HORVU3Hr1G098730.2 | Barley | endoplasmic reticulum, extracellular, mitochondrion | 91.74 | 87.11 |
| TraesCS3D01G451900.1 | Wheat | extracellular | 85.25 | 85.25 |
| TraesCS3D01G451500.1 | Wheat | extracellular | 74.93 | 76.05 |
| EES17528 | Sorghum | extracellular | 69.32 | 69.32 |
| TraesCS7D01G200000.1 | Wheat | cytosol | 53.98 | 58.47 |
| TraesCS1D01G010800.1 | Wheat | extracellular | 57.23 | 57.57 |
| TraesCS2D01G470400.1 | Wheat | extracellular | 51.03 | 50.58 |
| TraesCS2D01G470500.1 | Wheat | extracellular, vacuole | 48.97 | 48.4 |
| Bra009236.1-P | Field mustard | extracellular | 47.2 | 47.9 |
| CDX70058 | Canola | extracellular | 47.2 | 47.9 |
| CDX98966 | Canola | extracellular | 46.9 | 47.6 |
| CDX98965 | Canola | extracellular | 46.02 | 46.99 |
| AT5G06860.1 | Thale cress | extracellular | 45.72 | 46.97 |
| Bra009234.1-P | Field mustard | extracellular | 45.72 | 46.83 |
| CDX70057 | Canola | extracellular | 46.31 | 46.73 |
| Bra009237.1-P | Field mustard | extracellular | 46.31 | 46.73 |
| CDX70059 | Canola | extracellular | 46.02 | 46.71 |
| Bra009235.1-P | Field mustard | extracellular | 46.02 | 46.71 |
| CDX70060 | Canola | extracellular | 45.72 | 46.69 |
| CDX98967 | Canola | extracellular | 46.02 | 46.43 |
| GSMUA_Achr9P12430_001 | Banana | extracellular | 41.3 | 46.36 |
| Bra005918.1-P | Field mustard | extracellular | 28.02 | 46.34 |
| VIT_13s0064g01370.t01 | Wine grape | extracellular | 44.54 | 45.48 |
| CDX81023 | Canola | extracellular | 45.72 | 45.32 |
| Bra009238.1-P | Field mustard | extracellular | 44.25 | 45.18 |
| AT5G06870.1 | Thale cress | extracellular | 43.95 | 45.15 |
| KRG95348 | Soybean | mitochondrion | 46.02 | 44.44 |
| Bra005917.1-P | Field mustard | extracellular | 44.84 | 44.44 |
| CDY58884 | Canola | extracellular | 43.36 | 44.41 |
| CDY58887 | Canola | extracellular | 43.07 | 44.24 |
| CDY58888 | Canola | extracellular | 44.54 | 44.15 |
| Bra005919.1-P | Field mustard | extracellular | 43.07 | 44.11 |
| TraesCS7D01G190900.1 | Wheat | extracellular | 36.58 | 43.51 |
| Solyc09g014590.2.1 | Tomato | extracellular | 39.53 | 42.95 |
| PGSC0003DMT400021883 | Potato | extracellular | 42.18 | 42.81 |
| KRH12977 | Soybean | nucleus | 42.77 | 42.77 |
| Solyc09g014480.1.1 | Tomato | extracellular | 41.59 | 42.09 |
| TraesCS2D01G207200.1 | Wheat | extracellular | 40.41 | 41.02 |
| Bra005916.1-P | Field mustard | extracellular | 41.89 | 40.92 |
| KRH12976 | Soybean | cytosol | 44.54 | 40.59 |
| CDY58889 | Canola | extracellular | 41.3 | 40.35 |
| CDX98968 | Canola | endoplasmic reticulum, extracellular, vacuole | 44.25 | 38.96 |
| CDX70056 | Canola | extracellular | 44.25 | 37.04 |
| TraesCS7D01G243300.1 | Wheat | extracellular | 31.86 | 28.42 |
| TraesCS2D01G561100.1 | Wheat | extracellular | 32.74 | 25.06 |
| CDX81022 | Canola | extracellular, plasma membrane | 36.87 | 24.7 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G451400.1 | EnsemblPlantsGene:TraesCS3D01G451400 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| PANTHER:PTHR44138 | PFAM:PF08263 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52058 | MapMan:26.8.3.4 |
Description
No Description!
Coordinates
chr3D:+:559162506..559163722
Molecular Weight (calculated)
36212.6 Da
IEP (calculated)
7.543
GRAVY (calculated)
0.116
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MRMHSHALLV VLLCSLLAGA GNAEPSPDPT YKDCHPGDKA ALLAFKAALG EPYHLSGWTS DSPCCDWNGV TCDHFTGRVV SLAVFQDANI TGTIPSALAG
101: LPHLQDLTLR HLPLLSGPIP PAIGKLSNLS SLRISWTAVS GPVPSFLGSL KKLTFLELSF NSLTGAIPAS LGTIPNLSGI NLSRNRLTGA IPMFLSKSAD
201: QVYLWLSHNN LTGPLPAGFA AVNFAHLDLS RNDLTGDASG LFGRGKELQY IDLSRNDFDF DLSGVVLPEQ LYFVDVSHNA IHGSIPAQVA NLSNLQFFNV
301: SYNKLCGPVP TGGNMARLNL YNFQHNKCLC SAPLPPCKK
101: LPHLQDLTLR HLPLLSGPIP PAIGKLSNLS SLRISWTAVS GPVPSFLGSL KKLTFLELSF NSLTGAIPAS LGTIPNLSGI NLSRNRLTGA IPMFLSKSAD
201: QVYLWLSHNN LTGPLPAGFA AVNFAHLDLS RNDLTGDASG LFGRGKELQY IDLSRNDFDF DLSGVVLPEQ LYFVDVSHNA IHGSIPAQVA NLSNLQFFNV
301: SYNKLCGPVP TGGNMARLNL YNFQHNKCLC SAPLPPCKK
001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK
Arabidopsis Description
PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.