Factsheet for TraesCS3D01G451900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G459300.1	Wheat	cytosol	41.3	94.59
TraesCS3D01G451800.1	Wheat	extracellular	89.68	89.41
TraesCS3D01G451400.1	Wheat	extracellular	85.25	85.25
TraesCS3D01G451500.1	Wheat	extracellular	75.52	76.65
EES17528	Sorghum	extracellular	69.32	69.32
TraesCS7D01G200000.1	Wheat	cytosol	55.75	60.38
TraesCS1D01G010800.1	Wheat	extracellular	57.82	58.16
TraesCS2D01G470400.1	Wheat	extracellular	51.33	50.88
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	51.33	50.73
CDX70058	Canola	extracellular	47.2	47.9
Bra009236.1-P	Field mustard	extracellular	46.61	47.31
CDX98965	Canola	extracellular	46.31	47.29
Bra009234.1-P	Field mustard	extracellular	46.02	47.13
CDX70057	Canola	extracellular	46.61	47.02
Bra009237.1-P	Field mustard	extracellular	46.61	47.02
CDX98966	Canola	extracellular	46.31	47.01
CDX70060	Canola	extracellular	46.02	46.99
AT5G06860.1	Thale cress	extracellular	45.72	46.97
Bra005918.1-P	Field mustard	extracellular	28.32	46.83
CDX98967	Canola	extracellular	46.31	46.73
KRG95348	Soybean	mitochondrion	48.38	46.72
VIT_13s0064g01370.t01	Wine grape	extracellular	45.72	46.69
CDX70059	Canola	extracellular	45.72	46.41
Bra009235.1-P	Field mustard	extracellular	45.43	46.11
AT5G06870.1	Thale cress	extracellular	44.54	45.76
GSMUA_Achr9P12430_001	Banana	extracellular	40.71	45.7
CDY58887	Canola	extracellular	44.25	45.45
CDX81023	Canola	extracellular	45.72	45.32
CDY58884	Canola	extracellular	44.25	45.32
CDY58888	Canola	extracellular	45.43	45.03
Bra005917.1-P	Field mustard	extracellular	45.43	45.03
Bra005919.1-P	Field mustard	extracellular	43.95	45.02
Bra009238.1-P	Field mustard	extracellular	43.36	44.28
KRH12977	Soybean	nucleus	43.36	43.36
PGSC0003DMT400021883	Potato	extracellular	42.48	43.11
Solyc09g014480.1.1	Tomato	extracellular	42.18	42.69
Solyc09g014590.2.1	Tomato	extracellular	39.23	42.63
KRH12976	Soybean	cytosol	46.61	42.47
TraesCS7D01G190900.1	Wheat	extracellular	35.1	41.75
Bra005916.1-P	Field mustard	extracellular	42.48	41.5
CDY58889	Canola	extracellular	41.89	40.92
TraesCS2D01G207200.1	Wheat	extracellular	40.12	40.72
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	43.66	38.44
CDX70056	Canola	extracellular	43.36	36.3
TraesCS7D01G243300.1	Wheat	extracellular	31.86	28.42
CDX81022	Canola	extracellular, plasma membrane	36.58	24.51
TraesCS2D01G561100.1	Wheat	extracellular	31.86	24.38

Protein Annotations

EnsemblPlants:TraesCS3D01G451900.1	EnsemblPlantsGene:TraesCS3D01G451900	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
PANTHER:PTHR44138	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	MapMan:26.8.3.4

Description

No Description!

Coordinates

chr3D:-:559227229..559228248

Molecular Weight (calculated)

36229.4 Da

IEP (calculated)

6.406

GRAVY (calculated)

0.123

Length

339 amino acids

Sequence
(BLAST)

001: MRIHSPALLV LLLCSLLAGA ANAEPSPEPT YKDCHPGDKA ALLAFKAAFG EAYDFASWTP NNPCCDWYDV TCDRFTGRVI GLAIFQDANL TGTIPTALAG
101: LPHLEDLTLR HLPGLSGPIP PAIGKLSNLS SLRISWTAAS GPVPSFLGAL KKLNFLDLSF NSLSGAIPAS LGTIPNLSGI NLSRNRLTGA IPPMFLSKSP
201: HQDVYLWLSH NNLTGPIPAD FAAVNFTHLD LSRNDLTGDA SGLFGRGKEL QYIDLSRNAF DFDLSGLVLP ERLYFVDVSH NAIDGSIPAQ VASMSNLNFF
301: NVSYNRLCGP VPAGGNMAGF DLYNFQHNKC LCGAPLPSC

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.