CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005916.1-P	Field mustard	extracellular	97.41	97.41
CDY58888	Canola	extracellular	81.27	82.46
CDY58887	Canola	extracellular	77.81	81.82
CDX81023	Canola	extracellular	80.4	81.58
CDY58884	Canola	extracellular	77.23	80.97
AT5G06870.1	Thale cress	extracellular	68.59	72.12
CDX70060	Canola	extracellular	67.72	70.78
CDX98965	Canola	extracellular	67.72	70.78
CDX70059	Canola	extracellular	66.86	69.46
CDX98966	Canola	extracellular	66.86	69.46
CDX70058	Canola	extracellular	66.28	68.86
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	75.22	67.79
CDX70057	Canola	extracellular	64.55	66.67
CDX98967	Canola	extracellular	63.69	65.77
CDX70056	Canola	extracellular	75.22	64.44
CDX81022	Canola	extracellular, plasma membrane	84.73	58.1
PGSC0003DMT400057136	Potato	extracellular	52.16	55.18
Solyc07g065090.1.1	Tomato	extracellular	51.87	55.05
VIT_08s0007g07690.t01	Wine grape	extracellular	53.89	54.36
KRH12977	Soybean	nucleus	53.03	54.28
KRG95348	Soybean	mitochondrion	54.76	54.13
CDY52623	Canola	extracellular, vacuole	47.55	50.77
CDY50569	Canola	extracellular, vacuole	46.97	50.15
KRH12976	Soybean	cytosol	52.74	49.19
CDY05006	Canola	extracellular	45.82	49.07
CDY42127	Canola	extracellular	45.24	48.16
CDY42131	Canola	extracellular	44.38	47.68
CDY08451	Canola	endoplasmic reticulum, extracellular	44.67	47.55
CDY14065	Canola	extracellular	44.38	47.53
CDY42130	Canola	extracellular	44.67	47.4
CDY08448	Canola	extracellular	44.38	47.09
TraesCS3A01G459300.1	Wheat	cytosol	19.88	46.62
GSMUA_Achr9P12430_001	Banana	extracellular	39.77	45.7
CDY08450	Canola	extracellular	42.36	45.51
CDY42129	Canola	cytosol	42.07	45.06
Os05t0104200-01	Rice	extracellular	38.33	43.04
TraesCS3A01G459200.1	Wheat	extracellular	42.07	42.94
TraesCS3D01G451800.1	Wheat	extracellular	41.79	42.65
Zm00001d035753_P001	Maize	extracellular	41.79	42.52
TraesCS3B01G498900.1	Wheat	extracellular	41.21	42.06
HORVU3Hr1G098610.1	Barley	extracellular	40.63	41.96
TraesCS3D01G451900.1	Wheat	extracellular	40.92	41.89
TraesCS3D01G451400.1	Wheat	extracellular	40.35	41.3
TraesCS7D01G200000.1	Wheat	cytosol	37.18	41.21
EES17528	Sorghum	extracellular	40.06	41.0
EES17529	Sorghum	extracellular	40.06	40.76
TraesCS3A01G459000.1	Wheat	extracellular	40.06	40.76
Os05t0104150-01	Rice	extracellular	40.06	40.64
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	41.79	40.62
TraesCS1A01G012600.1	Wheat	extracellular	39.19	40.48
TraesCS3D01G451500.1	Wheat	extracellular	38.9	40.42
TraesCS1D01G010800.1	Wheat	extracellular	39.19	40.36
Os05t0104600-01	Rice	extracellular	39.19	40.12
TraesCS1B01G017300.1	Wheat	extracellular	38.04	39.17
Zm00001d035756_P001	Maize	vacuole	39.48	39.14
TraesCS7B01G103900.1	Wheat	extracellular	36.89	37.98
TraesCS2D01G470400.1	Wheat	extracellular	36.6	37.13
TraesCS2A01G470500.1	Wheat	extracellular	36.6	37.13
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	36.02	36.44
TraesCS2B01G493300.1	Wheat	extracellular	35.73	35.94
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	38.04	35.87
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	35.16	35.67
EES17527	Sorghum	extracellular, plastid	40.35	35.62
HORVU2Hr1G106620.1	Barley	extracellular	34.87	35.59
TraesCS2A01G470600.1	Wheat	extracellular	34.29	35.21
Os05t0104700-01	Rice	extracellular	40.06	34.66
TraesCS7A01G197500.1	Wheat	extracellular	15.27	28.96
CDX85681	Canola	extracellular	27.95	28.12
CDX91155	Canola	extracellular	27.95	28.03
CDY19601	Canola	extracellular	29.11	27.67
CDY52664	Canola	extracellular	29.68	27.61
CDX73812	Canola	endoplasmic reticulum, extracellular, vacuole	29.11	27.15
CDY00787	Canola	endoplasmic reticulum, extracellular, vacuole	29.11	27.15
CDY60388	Canola	extracellular	28.53	27.12
CDY06385	Canola	extracellular	28.53	27.12
CDY50534	Canola	extracellular, vacuole	29.11	27.08
CDY27559	Canola	extracellular	28.24	26.85
CDY68308	Canola	extracellular	28.24	26.2
CDY53975	Canola	extracellular	27.95	26.01
CDY69775	Canola	extracellular, plasma membrane	27.95	25.73
CDY69275	Canola	extracellular	27.09	25.13
CDY40923	Canola	extracellular, vacuole	27.09	20.04
CDY38783	Canola	extracellular	23.63	20.0
CDY15279	Canola	plastid	24.21	19.72
CDX80361	Canola	extracellular, vacuole	32.56	19.25
CDX88024	Canola	extracellular, vacuole	32.56	19.25
CDY11623	Canola	extracellular	23.05	19.14
CDY64876	Canola	extracellular, vacuole	31.41	18.7
CDX93759	Canola	endoplasmic reticulum, extracellular, vacuole	8.65	18.4
CDX93758	Canola	plastid	13.54	18.29
CDY16850	Canola	plastid	25.07	17.58

Protein Annotations

EnsemblPlants:CDY58889	EnsemblPlantsGene:GSBRNA2T00025295001	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
PANTHER:PTHR44138	PFAM:PF08263	ProteinID:CDY58889	ProteinID:CDY58889.1	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52058	UniParc:UPI0004EE0BED	UniProt:A0A078J6N9	MapMan:26.8.3.4	:	:

Description

BnaA03g55650DBnaA03g55650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6N9]

Coordinates

chrLK033708:-:47863..49262

Molecular Weight (calculated)

38688.5 Da

IEP (calculated)

6.162

GRAVY (calculated)

-0.048

Length

347 amino acids

Sequence
(BLAST)

001: MDKITIALLF ALFALLLTTS FSKDLCHKDD ENTLLKIKKS LNNPYTIISW DPKDDCCTWV SVECGDATVD HRVISLDISN DDVSAQIPPE VGDLSYLQTL
101: IFRKLPNLTG EIKPTIAKLK YLRFLWLSWT NLTGPVPEFL SQLKDLEYIN LSFNDLSGSI PGSLSLLPKL GILELSRNKL TGSIPESFGA FKGVVPLEIF
201: LSHNQLSGSI PKSLGNLDFH RIDFSHNKLE GDASMMFGAK KTSWSVDLSR NKLQFDISKV KVATTVNNLD LNHNRITGSI PVQWTELTLQ SFNVSYNRLC
301: GRIPQGGDLQ IFDAYAYVHN KCLCGAPLQS CNVEIQATDL YLNLPSE

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.