Factsheet for TraesCS2A01G470600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	90.24	88.92
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	86.09	85.09
HORVU2Hr1G106620.1	Barley	extracellular	85.21	84.71
TraesCS2A01G470500.1	Wheat	extracellular	65.09	64.33
TraesCS3A01G459300.1	Wheat	cytosol	24.56	56.08
TraesCS3A01G459200.1	Wheat	extracellular	49.41	49.12
TraesCS3A01G459000.1	Wheat	extracellular	47.34	46.92
Os05t0104600-01	Rice	extracellular	45.56	45.43
TraesCS1A01G012600.1	Wheat	extracellular	44.67	44.94
Bra005918.1-P	Field mustard	extracellular	25.15	41.46
Solyc09g014590.2.1	Tomato	extracellular	38.17	41.35
Solyc09g014480.1.1	Tomato	extracellular	40.83	41.19
Os05t0104700-01	Rice	extracellular	47.63	40.15
Bra009236.1-P	Field mustard	extracellular	39.65	40.12
TraesCS7A01G189800.1	Wheat	endoplasmic reticulum, extracellular	33.14	39.72
Bra009237.1-P	Field mustard	extracellular	39.35	39.58
GSMUA_Achr9P12430_001	Banana	extracellular	35.21	39.4
Bra009234.1-P	Field mustard	extracellular	38.46	39.27
CDX70058	Canola	extracellular	38.76	39.22
CDX98966	Canola	extracellular	38.76	39.22
CDX70057	Canola	extracellular	38.76	38.99
VIT_13s0064g01370.t01	Wine grape	extracellular	38.17	38.86
PGSC0003DMT400021883	Potato	extracellular	38.17	38.62
CDX70059	Canola	extracellular	38.17	38.62
Bra009235.1-P	Field mustard	extracellular	38.17	38.62
CDX98965	Canola	extracellular	37.87	38.55
CDX70060	Canola	extracellular	37.87	38.55
CDY58884	Canola	extracellular	37.28	38.07
AT5G06870.1	Thale cress	extracellular	36.98	37.88
CDX98967	Canola	extracellular	37.57	37.8
Bra005919.1-P	Field mustard	extracellular	36.98	37.76
CDX81023	Canola	extracellular	37.57	37.13
KRG95348	Soybean	mitochondrion	38.46	37.04
CDY58887	Canola	extracellular	36.09	36.97
Bra005917.1-P	Field mustard	extracellular	37.28	36.84
CDY58888	Canola	extracellular	37.28	36.84
AT5G06860.1	Thale cress	extracellular	35.8	36.67
KRH12977	Soybean	nucleus	36.69	36.58
TraesCS5A01G266200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	34.02	36.28
Bra009238.1-P	Field mustard	extracellular	34.91	35.54
TraesCS2A01G199600.1	Wheat	extracellular	35.21	35.52
TraesCS7A01G197500.1	Wheat	extracellular	19.23	35.52
Bra005916.1-P	Field mustard	extracellular	35.8	34.87
CDY58889	Canola	extracellular	35.21	34.29
KRH12976	Soybean	cytosol	36.39	33.06
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	34.62	30.39
CDX70056	Canola	extracellular	34.91	29.14
TraesCS7A01G244600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	28.7	25.53
TraesCS2A01G593600.1	Wheat	endoplasmic reticulum, extracellular	27.81	21.03
CDX81022	Canola	extracellular, plasma membrane	30.18	20.16

Protein Annotations

EnsemblPlants:TraesCS2A01G470600.1	EnsemblPlantsGene:TraesCS2A01G470600	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
PANTHER:PTHR44138	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	MapMan:26.8.3.4

Description

No Description!

Coordinates

chr2A:-:713150412..713165837

Molecular Weight (calculated)

36161.6 Da

IEP (calculated)

6.495

GRAVY (calculated)

0.214

Length

338 amino acids

Sequence
(BLAST)

001: MEHCDTLVVV VLLAAAAAAR ANNECHPGNK AALLAIKSAF GNASYFNSWT PATPCCEWAN VSCDGSASPY TTRRIVGVSL VNDASLAGPL PSAAIARLTA
101: LQQLVLNYMP GVNGTIPRYL TRLKATLSFL DIISMGISGP VSLFLSEITA LSYLSLSFNK LTGPIPASLG DMPNLYFLDL GYNRLTGTIP PQLLRKGSYV
201: YLSHNKLTGS LTGGVPAEFA AVNFWTIDLS YNGFQGEASF LLGANKPLLN LDLSHNAFSF NLSAVQLPEG LNSLELSHNE IYGEIPEMVV DMMLNYLNVS
301: YNRLGGVVPA GGNMAWFDQS CFQHNKGLCG SPLPPCKQ

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.