Factsheet for TraesCS2D01G470500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G106620.1	Barley	extracellular	90.96	91.76
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	90.96	91.23
TraesCS2A01G470600.1	Wheat	extracellular	88.92	90.24
TraesCS2D01G470400.1	Wheat	extracellular	69.1	69.3
TraesCS3D01G451900.1	Wheat	extracellular	50.73	51.33
TraesCS3D01G451800.1	Wheat	extracellular	50.44	50.88
TraesCS7D01G200000.1	Wheat	cytosol	45.77	50.16
TraesCS3D01G451500.1	Wheat	extracellular	48.4	49.7
TraesCS3D01G451400.1	Wheat	extracellular	48.4	48.97
Os05t0104600-01	Rice	extracellular	47.52	48.08
TraesCS1D01G010800.1	Wheat	extracellular	46.94	47.77
Bra005918.1-P	Field mustard	extracellular	26.53	44.39
Solyc09g014590.2.1	Tomato	extracellular	39.36	43.27
Os05t0104700-01	Rice	extracellular	50.44	43.14
Solyc09g014480.1.1	Tomato	extracellular	41.4	42.39
Bra009236.1-P	Field mustard	extracellular	40.82	41.92
Bra009237.1-P	Field mustard	extracellular	40.52	41.37
GSMUA_Achr9P12430_001	Banana	extracellular	36.15	41.06
CDX70058	Canola	extracellular	39.94	41.02
CDX98966	Canola	extracellular	39.94	41.02
CDX70057	Canola	extracellular	39.94	40.77
PGSC0003DMT400021883	Potato	extracellular	39.65	40.72
CDX70059	Canola	extracellular	39.36	40.42
Bra009235.1-P	Field mustard	extracellular	39.36	40.42
VIT_13s0064g01370.t01	Wine grape	extracellular	38.78	40.06
TraesCS7D01G190900.1	Wheat	extracellular	33.24	40.0
Bra009234.1-P	Field mustard	extracellular	38.48	39.88
CDX70060	Canola	extracellular	38.48	39.76
CDX98965	Canola	extracellular	38.48	39.76
CDX98967	Canola	extracellular	38.78	39.58
CDY58884	Canola	extracellular	38.19	39.58
Bra005919.1-P	Field mustard	extracellular	37.9	39.27
AT5G06870.1	Thale cress	extracellular	37.61	39.09
CDY58887	Canola	extracellular	37.32	38.79
TraesCS2D01G207200.1	Wheat	extracellular	37.61	38.62
CDX81023	Canola	extracellular	38.48	38.6
CDY58888	Canola	extracellular	38.19	38.3
Bra005917.1-P	Field mustard	extracellular	38.19	38.3
Bra009238.1-P	Field mustard	extracellular	36.73	37.95
KRG95348	Soybean	mitochondrion	38.78	37.89
AT5G06860.1	Thale cress	extracellular	36.44	37.88
Bra005916.1-P	Field mustard	extracellular	37.61	37.18
KRH12977	Soybean	nucleus	36.15	36.58
CDY58889	Canola	extracellular	36.44	36.02
KRH12976	Soybean	cytosol	37.03	34.14
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	36.44	32.47
CDX70056	Canola	extracellular	36.73	31.11
TraesCS7D01G243300.1	Wheat	extracellular	30.32	27.37
TraesCS2D01G561100.1	Wheat	extracellular	28.86	22.35
CDX81022	Canola	extracellular, plasma membrane	31.78	21.54

Protein Annotations

EnsemblPlants:TraesCS2D01G470500.1	EnsemblPlantsGene:TraesCS2D01G470500	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138
PFAM:PF08263	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	TMHMM:TMhelix
MapMan:26.8.3.4	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:574823975..574825006

Molecular Weight (calculated)

36371.5 Da

IEP (calculated)

6.228

GRAVY (calculated)

0.192

Length

343 amino acids

Sequence
(BLAST)

001: MRASSLVEHC ATVVAVVLLA AAAAAAAART KDECHSGDKA ALLAIKSAFG NASYFNSWTP DTPCCEWANV SCDGSASPYT ARRVVGVSLV NDASLAGPLP
101: GAAIARLTAL QQLVLNYVPG VNGSIPRDLT RLNATLSFLD IISTGISGPV PSFLSEITAL SYLSLSSNKL TGSIPASLAD MPNLYFLDLG YNRLTGTIPP
201: QLLRKGSYLY LSHNKLTGSV PAEFAAVNFW TIDLSYNGFK GDASFLLGAN KPLLNLDLSH NAFSFNLSGV QLPEGLNSLE LSHNEIYGDI PEMVVDMMLN
301: YLNVSYNRLS GVVPAGGNMA WFDQSCFQHN KGLCGSPLPP CKQ

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.