Factsheet for TraesCS3D01G451800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G459200.1	Wheat	extracellular	95.59	95.59
TraesCS3B01G498900.1	Wheat	extracellular	95.29	95.29
TraesCS3D01G451400.1	Wheat	extracellular	91.47	91.74
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	95.88	91.32
TraesCS3D01G451900.1	Wheat	extracellular	89.41	89.68
TraesCS3D01G451500.1	Wheat	extracellular	75.59	76.95
EES17528	Sorghum	extracellular	71.47	71.68
TraesCS1D01G010800.1	Wheat	extracellular	60.59	61.13
TraesCS7D01G200000.1	Wheat	cytosol	55.88	60.7
TraesCS2D01G470400.1	Wheat	extracellular	54.12	53.8
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	50.88	50.44
Bra009236.1-P	Field mustard	extracellular	48.82	49.7
CDX70058	Canola	extracellular	48.82	49.7
Bra005918.1-P	Field mustard	extracellular	29.71	49.27
CDX98965	Canola	extracellular	47.65	48.8
Bra009234.1-P	Field mustard	extracellular	47.35	48.64
Bra009237.1-P	Field mustard	extracellular	47.94	48.51
CDX70057	Canola	extracellular	47.94	48.51
CDX70060	Canola	extracellular	47.35	48.49
AT5G06860.1	Thale cress	extracellular	47.06	48.48
CDX98967	Canola	extracellular	47.65	48.21
CDX98966	Canola	extracellular	47.35	48.2
CDX70059	Canola	extracellular	47.06	47.9
Bra009235.1-P	Field mustard	extracellular	46.76	47.6
AT5G06870.1	Thale cress	extracellular	45.59	46.97
CDX81023	Canola	extracellular	47.06	46.78
GSMUA_Achr9P12430_001	Banana	extracellular	41.47	46.69
VIT_13s0064g01370.t01	Wine grape	extracellular	45.59	46.69
Bra005917.1-P	Field mustard	extracellular	46.76	46.49
CDY58884	Canola	extracellular	45.0	46.22
CDY58888	Canola	extracellular	46.47	46.2
KRG95348	Soybean	mitochondrion	47.65	46.15
CDY58887	Canola	extracellular	44.71	46.06
Bra005919.1-P	Field mustard	extracellular	44.71	45.92
Bra009238.1-P	Field mustard	extracellular	44.71	45.78
PGSC0003DMT400021883	Potato	extracellular	43.53	44.31
Solyc09g014480.1.1	Tomato	extracellular	43.24	43.88
Solyc09g014590.2.1	Tomato	extracellular	40.0	43.59
TraesCS7D01G190900.1	Wheat	extracellular	36.47	43.51
KRH12977	Soybean	nucleus	43.24	43.36
Bra005916.1-P	Field mustard	extracellular	43.24	42.36
CDY58889	Canola	extracellular	42.65	41.79
KRH12976	Soybean	cytosol	45.59	41.67
TraesCS2D01G207200.1	Wheat	extracellular	40.59	41.32
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	44.71	39.48
CDX70056	Canola	extracellular	44.71	37.53
TraesCS7D01G243300.1	Wheat	extracellular	32.35	28.95
CDX81022	Canola	extracellular, plasma membrane	37.35	25.1
TraesCS2D01G561100.1	Wheat	extracellular	32.65	25.06

Protein Annotations

EnsemblPlants:TraesCS3D01G451800.1	EnsemblPlantsGene:TraesCS3D01G451800	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
PANTHER:PTHR44138	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	MapMan:26.8.3.4

Description

No Description!

Coordinates

chr3D:-:559218693..559219715

Molecular Weight (calculated)

36533.9 Da

IEP (calculated)

7.500

GRAVY (calculated)

0.113

Length

340 amino acids

Sequence
(BLAST)

001: MRMRSRALLV LLLCSLLAGA ANAEPSPDPT YKDCHPGDKA ALLAFKAALG EAYHFASWTP DNPCCDWYDV TCDHFTGRVV GLAVFQDANL TGTIPSALAG
101: LPHLQDLTLR HLPRLSGPIP PAIGKLSNLS SLRISWTAVS GPVPSFLGAL KKLTFLELSF NSLSGAIPAS LGTIPNLSGI NLSRNRLTGA IPPMFLSKSA
201: DQVYLWLSHN NLTGPVPAGF AAVEFAHLDL SRNALTGDAS GLFGRGKELQ YIDLSRNDFD FDLSAVVLPE QLYFVDVSHN AIHGSIPAQV ASLSNLQFFN
301: VSYNRLCGPV PTGGNMERFD LYNFQHNKCL CGAPLPACKK

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.