Factsheet for Bra005916.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58889	Canola	extracellular	97.41	97.41
Bra005917.1-P	Field mustard	extracellular	80.98	82.16
Bra005919.1-P	Field mustard	extracellular	77.52	81.27
Bra005918.1-P	Field mustard	extracellular	47.26	80.0
Bra009238.1-P	Field mustard	extracellular	74.93	78.31
AT5G06870.1	Thale cress	extracellular	69.16	72.73
Bra009234.1-P	Field mustard	extracellular	67.72	71.0
Bra009235.1-P	Field mustard	extracellular	68.01	70.66
Bra009236.1-P	Field mustard	extracellular	65.42	67.96
Bra009237.1-P	Field mustard	extracellular	64.27	66.37
Solyc07g065090.1.1	Tomato	extracellular	52.45	55.66
VIT_08s0007g07690.t01	Wine grape	extracellular	55.04	55.52
PGSC0003DMT400057136	Potato	extracellular	52.45	55.49
KRH12977	Soybean	nucleus	53.31	54.57
KRG95348	Soybean	mitochondrion	55.04	54.42
Bra038700.1-P	Field mustard	extracellular, vacuole	48.13	51.38
KRH12976	Soybean	cytosol	53.6	50.0
Bra034773.1-P	Field mustard	cytosol	44.09	48.57
Bra034774.1-P	Field mustard	extracellular	45.53	48.47
TraesCS3A01G459300.1	Wheat	cytosol	20.17	47.3
GSMUA_Achr9P12430_001	Banana	extracellular	40.06	46.03
Os05t0104200-01	Rice	extracellular	38.9	43.69
TraesCS3A01G459200.1	Wheat	extracellular	42.65	43.53
TraesCS3D01G451800.1	Wheat	extracellular	42.36	43.24
Zm00001d035753_P001	Maize	extracellular	42.36	43.11
TraesCS3B01G498900.1	Wheat	extracellular	41.79	42.65
TraesCS3D01G451900.1	Wheat	extracellular	41.5	42.48
HORVU3Hr1G098610.1	Barley	extracellular	40.92	42.26
TraesCS7D01G200000.1	Wheat	cytosol	38.04	42.17
TraesCS3D01G451400.1	Wheat	extracellular	40.92	41.89
EES17528	Sorghum	extracellular	40.63	41.59
EES17529	Sorghum	extracellular	40.63	41.35
TraesCS3A01G459000.1	Wheat	extracellular	40.63	41.35
Os05t0104150-01	Rice	extracellular	40.63	41.23
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	42.36	41.18
TraesCS1A01G012600.1	Wheat	extracellular	39.77	41.07
TraesCS1D01G010800.1	Wheat	extracellular	39.77	40.95
Os05t0104600-01	Rice	extracellular	39.77	40.71
TraesCS3D01G451500.1	Wheat	extracellular	38.9	40.42
TraesCS1B01G017300.1	Wheat	extracellular	38.62	39.76
Zm00001d035756_P001	Maize	vacuole	40.06	39.71
TraesCS7B01G103900.1	Wheat	extracellular	37.46	38.58
TraesCS2A01G470500.1	Wheat	extracellular	37.46	38.01
TraesCS2D01G470400.1	Wheat	extracellular	37.46	38.01
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	37.18	37.61
TraesCS2B01G493300.1	Wheat	extracellular	36.6	36.81
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	38.9	36.68
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	36.02	36.55
HORVU2Hr1G106620.1	Barley	extracellular	35.45	36.18
EES17527	Sorghum	extracellular, plastid	40.92	36.13
TraesCS2A01G470600.1	Wheat	extracellular	34.87	35.8
Os05t0104700-01	Rice	extracellular	40.63	35.16
TraesCS7A01G197500.1	Wheat	extracellular	15.56	29.51
Bra035741.1-P	Field mustard	extracellular	29.39	27.95
Bra023383.1-P	Field mustard	extracellular	27.67	27.67
Bra001460.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	29.39	27.42
Bra038737.1-P	Field mustard	endoplasmic reticulum, extracellular	29.11	27.08
Bra008869.1-P	Field mustard	extracellular, plasma membrane	28.24	26.2
Bra008870.1-P	Field mustard	extracellular	27.67	25.74
Bra023925.1-P	Field mustard	extracellular	27.38	25.27
Bra028006.1-P	Field mustard	endoplasmic reticulum, vacuole	29.11	21.09
Bra010209.1-P	Field mustard	extracellular	27.67	20.08
Bra009680.1-P	Field mustard	extracellular, vacuole	32.85	19.42
Bra026499.1-P	Field mustard	plastid	25.36	17.78
Bra016239.1-P	Field mustard	cytosol	12.68	17.05

Protein Annotations

EnsemblPlants:Bra005916.1	EnsemblPlants:Bra005916.1-P	EnsemblPlantsGene:Bra005916	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	PANTHER:PTHR44138	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
UniParc:UPI000253F658	UniProt:M4CNX8	MapMan:26.8.3.4	:	:	:

Description

AT5G06870 (E=4e-124) PGIP2, ATPGIP2 | PGIP2 (POLYGALACTURONASE INHIBITING PROTEIN 2); protein binding

Coordinates

chrA03:+:1209672..1211071

Molecular Weight (calculated)

38584.4 Da

IEP (calculated)

6.162

GRAVY (calculated)

-0.076

Length

347 amino acids

Sequence
(BLAST)

001: MDKITTTLLF SLFALLLTAS LSKDLCHKDD ENALLKIKKS LNNPYTIISW DPKDDCCTWV SVECGDATVD HRVISLDISN DDVSAQIPPE VGDLSYLQTL
101: IFRKLPNLTG EIKPTIAKLK YLRFLWLSWT NLTGPVPEFL SQLKDLEYIN LSFNDLSGSI PGSLSLLPKL GILELSRNKL TGSIPESFGA FKGVVPPELF
201: LSHNQLSGSI PKSLGNLDFH RIDFSHNKLE GDASMMFGAK KTSWSVDLSR NKLQFDISKV KVATTVNNLD LNHNKITGSI PVQWTELTLQ SFNVSYNRLC
301: GRIPQGGDLQ IFDAYAYVHN KCLCGAPLQS CNVEIQATDL YLNLPSE

Best Arabidopsis Sequence Match ( AT5G06870.1 )
(BLAST)

001: MDKTMTLFLL LSTLLLTTSL AKDLCHKDDK TTLLKIKKSL NNPYHLASWD PKTDCCSWYC LECGDATVNH RVTSLIIQDG EISGQIPPEV GDLPYLTSLI
101: FRKLTNLTGH IQPTIAKLKN LTFLRLSWTN LTGPVPEFLS QLKNLEYIDL SFNDLSGSIP SSLSSLRKLE YLELSRNKLT GPIPESFGTF SGKVPSLFLS
201: HNQLSGTIPK SLGNPDFYRI DLSRNKLQGD ASILFGAKKT TWIVDISRNM FQFDLSKVKL AKTLNNLDMN HNGITGSIPA EWSKAYFQLL NVSYNRLCGR
301: IPKGEYIQRF DSYSFFHNKC LCGAPLPSCK

Arabidopsis Description

PGIP2PGIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDM1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.