Factsheet for Bra038737.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50534	Canola	extracellular, vacuole	99.2	99.2
Bra001460.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	87.67	87.9
AT3G12610.1	Thale cress	extracellular	87.4	87.63
Solyc01g086920.2.1	Tomato	nucleus	28.69	65.24
GSMUA_Achr4P01520_001	Banana	cytosol	46.65	63.27
VIT_13s0064g01260.t01	Wine grape	extracellular	60.05	62.92
KRH43480	Soybean	nucleus	59.79	62.29
GSMUA_Achr10P...	Banana	cytosol	45.84	62.18
KRH20845	Soybean	endoplasmic reticulum	60.32	61.48
KRH27500	Soybean	endoplasmic reticulum, extracellular	58.98	60.27
PGSC0003DMT400017733	Potato	extracellular	58.18	58.97
Bra035741.1-P	Field mustard	extracellular	56.3	57.53
Os08t0505900-01	Rice	extracellular	57.37	56.32
GSMUA_Achr3P03820_001	Banana	endoplasmic reticulum, extracellular	55.76	55.91
Bra008869.1-P	Field mustard	extracellular, plasma membrane	54.69	54.55
Bra023925.1-P	Field mustard	extracellular	54.69	54.26
KRH12883	Soybean	cytosol	23.06	54.09
Zm00001d031434_P001	Maize	extracellular	54.42	53.28
TraesCS7B01G146800.1	Wheat	extracellular	54.16	53.16
EES14271	Sorghum	cytosol	56.3	52.37
TraesCS7D01G243300.1	Wheat	extracellular	53.35	52.37
TraesCS7A01G244600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	53.35	52.37
Bra023383.1-P	Field mustard	extracellular	48.53	52.16
Bra008870.1-P	Field mustard	extracellular	52.01	52.01
HORVU7Hr1G050110.1	Barley	vacuole	53.89	51.8
HORVU7Hr1G050140.1	Barley	plastid	53.89	51.54
KRG91824	Soybean	extracellular	32.44	50.42
Bra034774.1-P	Field mustard	extracellular	29.22	33.44
Bra005918.1-P	Field mustard	extracellular	17.69	32.2
Bra009234.1-P	Field mustard	extracellular	28.15	31.72
Bra038700.1-P	Field mustard	extracellular, vacuole	27.61	31.69
Bra005919.1-P	Field mustard	extracellular	27.88	31.42
Bra009237.1-P	Field mustard	extracellular	28.15	31.25
Bra034773.1-P	Field mustard	cytosol	26.27	31.11
Bra005917.1-P	Field mustard	extracellular	28.42	30.99
Bra009235.1-P	Field mustard	extracellular	27.61	30.84
Bra009236.1-P	Field mustard	extracellular	27.61	30.84
Bra009238.1-P	Field mustard	extracellular	26.81	30.12
Bra005916.1-P	Field mustard	extracellular	27.08	29.11
Bra028006.1-P	Field mustard	endoplasmic reticulum, vacuole	31.9	24.84
Bra010209.1-P	Field mustard	extracellular	30.29	23.64
Bra009680.1-P	Field mustard	extracellular, vacuole	36.46	23.17
Bra026499.1-P	Field mustard	plastid	29.49	22.22
Bra016239.1-P	Field mustard	cytosol	14.21	20.54

Protein Annotations

EnsemblPlants:Bra038737.1	EnsemblPlants:Bra038737.1-P	EnsemblPlantsGene:Bra038737	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PANTHER:PTHR44401	PFAM:PF08263	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
UniParc:UPI000254522F	UniProt:M4FCB9	MapMan:35.1	:	:	:

Description

AT3G12610 (E=6e-183) DRT100 | DRT100 (DNA-DAMAGE REPAIR/TOLERATION 100); nucleotide binding / protein binding

Coordinates

chrA01:+:26378396..26379517

Molecular Weight (calculated)

39319.0 Da

IEP (calculated)

4.595

GRAVY (calculated)

0.092

Length

373 amino acids

Sequence
(BLAST)

001: MTKLLASPLS SLLLAVAFIS VITVVRSCSP TDQTALNAFK SSLSEPNLGI FNTWSENTDC CKGWYGISCD PDSGRVTDIS LRGESEDAIF QKAGRSGYMS
101: GSIDPAVCGL SALTSFVLAD WKGISGEIPP CVTSLASLRI LDLAGNRITG EIPTDIGKLT KLGVLNLAEN RMSGEIPSSL TSLSELKHLE LTENGISGEI
201: PADFGSLKML SRALLGRNEL TGSLPESMSG MDRLADLDLS RNHIEGPIPE WVGNMKVLSL LNLDCNSLTG TIPGSLLSNS GYGVLNLSRN ALEGSIPDVF
301: GSTTYFVALD LSHNNLAGRI PDSLSSAKFV GHLDISNNKL CGPIPTGSPF DHLEATSFSA NECLCGGPLM KAC

Best Arabidopsis Sequence Match ( AT3G12610.1 )
(BLAST)

001: MRKLLASPFS SLLAVVFISV ISVVRCCSPK DQTALNAFKS SLSEPNLGIF NTWSENTDCC KEWYGISCDP DSGRVTDISL RGESEDAIFQ KAGRSGYMSG
101: SIDPAVCDLT ALTSLVLADW KGITGEIPPC ITSLASLRIL DLAGNKITGE IPAEIGKLSK LAVLNLAENQ MSGEIPASLT SLIELKHLEL TENGITGVIP
201: ADFGSLKMLS RVLLGRNELT GSIPESISGM ERLADLDLSK NHIEGPIPEW MGNMKVLSLL NLDCNSLTGP IPGSLLSNSG LDVANLSRNA LEGTIPDVFG
301: SKTYLVSLDL SHNSLSGRIP DSLSSAKFVG HLDISHNKLC GRIPTGFPFD HLEATSFSDN QCLCGGPLTT SC

Arabidopsis Description

DRT100DRT100 [Source:UniProtKB/TrEMBL;Acc:A0A178VMS3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.