Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g086920.2.1 | Tomato | nucleus | 42.66 | 95.73 |
| VIT_13s0064g01260.t01 | Wine grape | extracellular | 68.21 | 70.51 |
| KRH43480 | Soybean | nucleus | 63.59 | 65.36 |
| GSMUA_Achr4P01520_001 | Banana | cytosol | 48.37 | 64.73 |
| GSMUA_Achr10P... | Banana | cytosol | 48.37 | 64.73 |
| KRH27500 | Soybean | endoplasmic reticulum, extracellular | 59.78 | 60.27 |
| PGSC0003DMT400003166 | Potato | extracellular, vacuole | 58.97 | 59.62 |
| KRH20845 | Soybean | endoplasmic reticulum | 58.97 | 59.29 |
| Bra001460.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 59.51 | 58.87 |
| CDY00787 | Canola | endoplasmic reticulum, extracellular, vacuole | 59.51 | 58.87 |
| GSMUA_Achr3P03820_001 | Banana | endoplasmic reticulum, extracellular | 59.24 | 58.6 |
| CDY50534 | Canola | extracellular, vacuole | 59.24 | 58.45 |
| CDX73812 | Canola | endoplasmic reticulum, extracellular, vacuole | 58.97 | 58.33 |
| CDY52664 | Canola | extracellular | 58.97 | 58.18 |
| Bra038737.1-P | Field mustard | endoplasmic reticulum, extracellular | 58.97 | 58.18 |
| AT3G12610.1 | Thale cress | extracellular | 58.7 | 58.06 |
| Os08t0505900-01 | Rice | extracellular | 57.61 | 55.79 |
| KRG91824 | Soybean | extracellular | 36.14 | 55.42 |
| KRH12883 | Soybean | cytosol | 23.64 | 54.72 |
| TraesCS7B01G146800.1 | Wheat | extracellular | 56.25 | 54.47 |
| TraesCS7A01G244600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 56.25 | 54.47 |
| TraesCS7D01G243300.1 | Wheat | extracellular | 55.98 | 54.21 |
| HORVU7Hr1G050110.1 | Barley | vacuole | 55.98 | 53.09 |
| HORVU7Hr1G050140.1 | Barley | plastid | 55.98 | 52.82 |
| Zm00001d031434_P001 | Maize | extracellular | 54.35 | 52.49 |
| EES14271 | Sorghum | cytosol | 55.98 | 51.37 |
| PGSC0003DMT400021883 | Potato | extracellular | 27.17 | 29.94 |
| PGSC0003DMT400057136 | Potato | extracellular | 26.09 | 29.27 |
| PGSC0003DMT400010749 | Potato | extracellular | 25.54 | 26.93 |
| PGSC0003DMT400043544 | Potato | extracellular | 31.25 | 24.06 |
| PGSC0003DMT400065091 | Potato | extracellular | 35.6 | 22.09 |
| PGSC0003DMT400058200 | Potato | extracellular, vacuole | 36.41 | 21.07 |
| PGSC0003DMT400009116 | Potato | endoplasmic reticulum, extracellular | 33.15 | 18.97 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | UniProt:M1A9D2 |
| PFAM:PF08263 | PFAM:PF13516 | PFAM:PF13855 | EnsemblPlantsGene:PGSC0003DMG400006880 | PGSC:PGSC0003DMG400006880 | EnsemblPlants:PGSC0003DMT400017733 |
| PRINTS:PR00019 | PANTHER:PTHR44401 | PANTHER:PTHR44401:SF2 | SMART:SM00369 | SUPFAM:SSF52058 | SignalP:SignalP-noTM |
| UniParc:UPI000295E8D2 | SEG:seg | : | : | : | : |
Description
DRT100 [Source:PGSC_GENE;Acc:PGSC0003DMG400006880]
Coordinates
chr1:-:66140208..66141654
Molecular Weight (calculated)
39263.4 Da
IEP (calculated)
6.382
GRAVY (calculated)
0.045
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLTGVTLLV TLMVVAAVTL PANACLPADQ AALMDIKAAL KEPYLGIFNT WTGSNCCQGW HGVSCDPTTQ RVADIVLRGE SEDPIYEKAG RSGYMTGSLS
101: PSLCKLDKLT TLIVADWKDI SGEIPACVTS LPDLRILELI GNKISGQIPE NIGQLSKLTV LNLADNKICG SIPASIVNLG KLKHLELSNN QLTGEIPSDI
201: GKLGMMSRAL LNKNKFTGSI PNSITQLRRL ADLDLSMNQI TGSLPAQLGS MPVLSTLNLD SNQISSSIPT NLLSSSGLNI LNLSRNSLEG ELPDVFCSKT
301: YFTHLDLSYN NLRGSVPKSL SSAKYIGHLD LSHNHLCGPI PNGSPFDHLE ASSFSNNDCL CGSPLRTC
101: PSLCKLDKLT TLIVADWKDI SGEIPACVTS LPDLRILELI GNKISGQIPE NIGQLSKLTV LNLADNKICG SIPASIVNLG KLKHLELSNN QLTGEIPSDI
201: GKLGMMSRAL LNKNKFTGSI PNSITQLRRL ADLDLSMNQI TGSLPAQLGS MPVLSTLNLD SNQISSSIPT NLLSSSGLNI LNLSRNSLEG ELPDVFCSKT
301: YFTHLDLSYN NLRGSVPKSL SSAKYIGHLD LSHNHLCGPI PNGSPFDHLE ASSFSNNDCL CGSPLRTC
001: MNLNVVVLLL LLLISSATCC PPSDRRALLA FRSALHEPYL GIFNSWTGQD CCHNWYGISC DSLTHRVADI NLRGESEDPI FERAHRTGYM TGHISASICE
101: LTRLSAITIA DWKGISGEIP KCITRLPFLR TLDLIGNQIS GGIPYDIGRL NRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRNNLISGV IPSDVGRLKM
201: LSRALLSGNR ITGRIPESLT NIYRLADVDL SGNQLYGTIP PSLGRMSVLA TLNLDGNKIS GEIPQTLMTS SVMNLNLSRN LLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PRSISGASFI GHLDLSHNHL CGRIPVGSPF DHLEAASFMF NDCLCGKPLR ACLKN
101: LTRLSAITIA DWKGISGEIP KCITRLPFLR TLDLIGNQIS GGIPYDIGRL NRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRNNLISGV IPSDVGRLKM
201: LSRALLSGNR ITGRIPESLT NIYRLADVDL SGNQLYGTIP PSLGRMSVLA TLNLDGNKIS GEIPQTLMTS SVMNLNLSRN LLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PRSISGASFI GHLDLSHNHL CGRIPVGSPF DHLEAASFMF NDCLCGKPLR ACLKN
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LT39]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.