Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g086920.2.1 | Tomato | nucleus | 33.43 | 72.56 |
| PGSC0003DMT400017733 | Potato | extracellular | 70.51 | 68.21 |
| GSMUA_Achr4P01520_001 | Banana | cytosol | 51.97 | 67.27 |
| GSMUA_Achr10P... | Banana | cytosol | 51.4 | 66.55 |
| VIT_06s0004g01750.t01 | Wine grape | extracellular | 67.7 | 66.21 |
| KRH43480 | Soybean | nucleus | 65.17 | 64.8 |
| KRH27500 | Soybean | endoplasmic reticulum, extracellular | 63.2 | 61.64 |
| GSMUA_Achr3P03820_001 | Banana | endoplasmic reticulum, extracellular | 64.33 | 61.56 |
| AT3G12610.1 | Thale cress | extracellular | 63.48 | 60.75 |
| Bra001460.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 63.2 | 60.48 |
| CDY52664 | Canola | extracellular | 63.2 | 60.32 |
| CDY00787 | Canola | endoplasmic reticulum, extracellular, vacuole | 62.92 | 60.22 |
| Bra038737.1-P | Field mustard | endoplasmic reticulum, extracellular | 62.92 | 60.05 |
| CDY50534 | Canola | extracellular, vacuole | 62.92 | 60.05 |
| KRH20845 | Soybean | endoplasmic reticulum | 61.52 | 59.84 |
| CDX73812 | Canola | endoplasmic reticulum, extracellular, vacuole | 62.36 | 59.68 |
| KRH12883 | Soybean | cytosol | 25.84 | 57.86 |
| Os08t0505900-01 | Rice | extracellular | 60.11 | 56.32 |
| KRG91824 | Soybean | extracellular | 35.67 | 52.92 |
| TraesCS7D01G243300.1 | Wheat | extracellular | 56.18 | 52.63 |
| TraesCS7B01G146800.1 | Wheat | extracellular | 56.18 | 52.63 |
| TraesCS7A01G244600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 55.9 | 52.37 |
| HORVU7Hr1G050110.1 | Barley | vacuole | 56.46 | 51.8 |
| HORVU7Hr1G050140.1 | Barley | plastid | 56.46 | 51.54 |
| Zm00001d031434_P001 | Maize | extracellular | 53.93 | 50.39 |
| EES14271 | Sorghum | cytosol | 56.46 | 50.12 |
| VIT_13s0064g01370.t01 | Wine grape | extracellular | 28.65 | 30.72 |
| VIT_08s0007g07690.t01 | Wine grape | extracellular | 28.37 | 29.36 |
| VIT_10s0071g00860.t01 | Wine grape | extracellular, vacuole | 35.96 | 21.66 |
| VIT_01s0026g01200.t01 | Wine grape | extracellular, plasma membrane | 36.24 | 20.12 |
| VIT_04s0023g02870.t01 | Wine grape | extracellular | 33.43 | 18.51 |
| VIT_18s0089g00010.t01 | Wine grape | plasma membrane | 30.62 | 11.41 |
Protein Annotations
| EntrezGene:100855260 | wikigene:100855260 | Gene3D:3.80.10.10 | MapMan:35.1 | ProteinID:AFA35119 | ProteinID:AFA35119.1 |
| ProteinID:CCB49487 | ProteinID:CCB49487.1 | UniProt:F6HBA8 | EMBL:FN595509 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 | EMBL:JQ326308 | EntrezGene:LOC100855260 | wikigene:LOC100855260 |
| InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | RefSeq:NP_001268187.1 | PFAM:PF08263 |
| PFAM:PF13855 | PANTHER:PTHR44401 | PANTHER:PTHR44401:SF2 | SMART:SM00369 | SUPFAM:SSF52058 | SignalP:SignalP-noTM |
| TIGR:TC62281 | UniParc:UPI0001984AE6 | ArrayExpress:VIT_13s0064g01260 | EnsemblPlantsGene:VIT_13s0064g01260 | EnsemblPlants:VIT_13s0064g01260.t01 | unigene:Vvi.9109 |
Description
DRT100-like protein [Source:UniProtKB/TrEMBL;Acc:F6HBA8]
Coordinates
chr13:-:23127104..23128471
Molecular Weight (calculated)
37956.7 Da
IEP (calculated)
6.018
GRAVY (calculated)
0.179
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLFLFLTAL IVAGATGVES CTPADRQALL DFKAALNEPY LGIFKSWSGN DCCSSWFGIS CDSAGRVADI NLRGESEDPI FERAGRSGYM TGAISPSICK
101: LDSLTTLIIA DWKGISGEIP PCISSLSKLR ILDLVGNKIT GVIPADIGKL QRLTVLNVAD NSISGSIPAS VVNLASLMHL DLRNNQITGG IPQDFGKLTM
201: LSRAMLGRNQ LTGTIPSSIS GLYRLADFDL SVNQISGVIP AELGSMPVLS TLNLDSNRLS GSIPASLLSN TGLNILNLSR NSLEGKLPDV FGSKTYFIGL
301: DLSYNNLKGQ IPKSLSSAAY IGHLDLSHNH LCGSIPTGWP FDHLEASSFS FNDCLW
101: LDSLTTLIIA DWKGISGEIP PCISSLSKLR ILDLVGNKIT GVIPADIGKL QRLTVLNVAD NSISGSIPAS VVNLASLMHL DLRNNQITGG IPQDFGKLTM
201: LSRAMLGRNQ LTGTIPSSIS GLYRLADFDL SVNQISGVIP AELGSMPVLS TLNLDSNRLS GSIPASLLSN TGLNILNLSR NSLEGKLPDV FGSKTYFIGL
301: DLSYNNLKGQ IPKSLSSAAY IGHLDLSHNH LCGSIPTGWP FDHLEASSFS FNDCLW
001: MNLNVVVLLL LLLISSATCC PPSDRRALLA FRSALHEPYL GIFNSWTGQD CCHNWYGISC DSLTHRVADI NLRGESEDPI FERAHRTGYM TGHISASICE
101: LTRLSAITIA DWKGISGEIP KCITRLPFLR TLDLIGNQIS GGIPYDIGRL NRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRNNLISGV IPSDVGRLKM
201: LSRALLSGNR ITGRIPESLT NIYRLADVDL SGNQLYGTIP PSLGRMSVLA TLNLDGNKIS GEIPQTLMTS SVMNLNLSRN LLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PRSISGASFI GHLDLSHNHL CGRIPVGSPF DHLEAASFMF NDCLCGKPLR ACLKN
101: LTRLSAITIA DWKGISGEIP KCITRLPFLR TLDLIGNQIS GGIPYDIGRL NRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRNNLISGV IPSDVGRLKM
201: LSRALLSGNR ITGRIPESLT NIYRLADVDL SGNQLYGTIP PSLGRMSVLA TLNLDGNKIS GEIPQTLMTS SVMNLNLSRN LLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PRSISGASFI GHLDLSHNHL CGRIPVGSPF DHLEAASFMF NDCLCGKPLR ACLKN
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LT39]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.