Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001460.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 98.92 | 98.92 |
| CDY00787 | Canola | endoplasmic reticulum, extracellular, vacuole | 98.12 | 98.12 |
| CDY52664 | Canola | extracellular | 88.71 | 88.47 |
| AT3G12610.1 | Thale cress | extracellular | 87.9 | 87.9 |
| CDY50534 | Canola | extracellular, vacuole | 87.63 | 87.4 |
| Solyc01g086920.2.1 | Tomato | nucleus | 29.57 | 67.07 |
| VIT_13s0064g01260.t01 | Wine grape | extracellular | 59.68 | 62.36 |
| KRH43480 | Soybean | nucleus | 59.68 | 62.01 |
| GSMUA_Achr4P01520_001 | Banana | cytosol | 45.7 | 61.82 |
| KRH20845 | Soybean | endoplasmic reticulum | 59.14 | 60.11 |
| GSMUA_Achr10P... | Banana | cytosol | 43.82 | 59.27 |
| PGSC0003DMT400017733 | Potato | extracellular | 58.33 | 58.97 |
| CDY27559 | Canola | extracellular | 57.26 | 58.36 |
| KRH27500 | Soybean | endoplasmic reticulum, extracellular | 57.26 | 58.36 |
| CDY60388 | Canola | extracellular | 57.26 | 58.36 |
| CDY19601 | Canola | extracellular | 56.72 | 57.81 |
| CDY06385 | Canola | extracellular | 56.45 | 57.53 |
| CDY69775 | Canola | extracellular, plasma membrane | 56.18 | 55.44 |
| CDY68308 | Canola | extracellular | 55.65 | 55.35 |
| CDX85681 | Canola | extracellular | 51.08 | 55.07 |
| CDX91155 | Canola | extracellular | 51.08 | 54.91 |
| Os08t0505900-01 | Rice | extracellular | 55.91 | 54.74 |
| CDY53975 | Canola | extracellular | 54.03 | 53.89 |
| GSMUA_Achr3P03820_001 | Banana | endoplasmic reticulum, extracellular | 53.76 | 53.76 |
| CDY69275 | Canola | extracellular | 53.76 | 53.48 |
| Zm00001d031434_P001 | Maize | extracellular | 54.57 | 53.28 |
| KRH12883 | Soybean | cytosol | 22.58 | 52.83 |
| EES14271 | Sorghum | cytosol | 55.91 | 51.87 |
| TraesCS7B01G146800.1 | Wheat | extracellular | 52.69 | 51.58 |
| TraesCS7D01G243300.1 | Wheat | extracellular | 51.88 | 50.79 |
| TraesCS7A01G244600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 51.88 | 50.79 |
| HORVU7Hr1G050110.1 | Barley | vacuole | 52.15 | 50.0 |
| HORVU7Hr1G050140.1 | Barley | plastid | 52.15 | 49.74 |
| KRG91824 | Soybean | extracellular | 31.99 | 49.58 |
| CDY08451 | Canola | endoplasmic reticulum, extracellular | 29.57 | 33.74 |
| CDY42127 | Canola | extracellular | 29.57 | 33.74 |
| CDY05006 | Canola | extracellular | 28.76 | 33.02 |
| CDY52623 | Canola | extracellular, vacuole | 28.49 | 32.62 |
| CDY08448 | Canola | extracellular | 28.49 | 32.42 |
| CDY42131 | Canola | extracellular | 27.96 | 32.2 |
| CDY14065 | Canola | extracellular | 27.96 | 32.1 |
| CDY58884 | Canola | extracellular | 28.49 | 32.02 |
| CDY42130 | Canola | extracellular | 27.96 | 31.8 |
| CDY50569 | Canola | extracellular, vacuole | 27.69 | 31.69 |
| CDX98965 | Canola | extracellular | 28.23 | 31.63 |
| CDY08450 | Canola | extracellular | 27.42 | 31.58 |
| CDX70057 | Canola | extracellular | 28.49 | 31.55 |
| CDX70060 | Canola | extracellular | 27.96 | 31.33 |
| CDY58888 | Canola | extracellular | 28.76 | 31.29 |
| CDY58887 | Canola | extracellular | 27.42 | 30.91 |
| CDY42129 | Canola | cytosol | 26.88 | 30.86 |
| CDX70058 | Canola | extracellular | 27.69 | 30.84 |
| CDX70059 | Canola | extracellular | 27.69 | 30.84 |
| CDX98967 | Canola | extracellular | 27.69 | 30.65 |
| CDX98966 | Canola | extracellular | 27.42 | 30.54 |
| CDX81023 | Canola | extracellular | 27.96 | 30.41 |
| CDY58889 | Canola | extracellular | 27.15 | 29.11 |
| CDX98968 | Canola | endoplasmic reticulum, extracellular, vacuole | 27.96 | 27.01 |
| CDX70056 | Canola | extracellular | 27.42 | 25.19 |
| CDX93759 | Canola | endoplasmic reticulum, extracellular, vacuole | 10.48 | 23.93 |
| CDX80361 | Canola | extracellular, vacuole | 37.37 | 23.68 |
| CDY40923 | Canola | extracellular, vacuole | 29.84 | 23.67 |
| CDX88024 | Canola | extracellular, vacuole | 37.1 | 23.51 |
| CDY64876 | Canola | extracellular, vacuole | 36.83 | 23.5 |
| CDY15279 | Canola | plastid | 26.88 | 23.47 |
| CDY16850 | Canola | plastid | 29.57 | 22.22 |
| CDY38783 | Canola | extracellular | 23.92 | 21.71 |
| CDY11623 | Canola | extracellular | 23.39 | 20.81 |
| CDX93758 | Canola | plastid | 13.44 | 19.46 |
| CDX81022 | Canola | extracellular, plasma membrane | 23.66 | 17.39 |
Protein Annotations
| EnsemblPlants:CDX73812 | EnsemblPlantsGene:GSBRNA2T00111506001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PANTHER:PTHR44401 |
| PFAM:PF08263 | PFAM:PF13516 | PFAM:PF13855 | ProteinID:CDX73812 | ProteinID:CDX73812.1 | SEG:seg |
| SignalP:SignalP-noTM | SUPFAM:SSF52058 | UniParc:UPI0004EDF06D | MapMan:35.1 | : | : |
Description
BnaA03g32350D
Coordinates
chrLK031800:+:39633..40925
Molecular Weight (calculated)
39568.5 Da
IEP (calculated)
4.829
GRAVY (calculated)
0.067
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKLLPSPFS SLLAVVFISL ISIVHCCSPK DQTALNAFKS SLNEPNLGIF NTWSENTDCC KGWYGISCDP DSGRVTDISL RGESEDAIFQ KAGRSGYMTG
101: SIDPAVCDLT ALSSFVLADW KGISGEIPTC ITSLASLRVI DLAGNKITGE IPAEIGKLTK LAVLNLAENR MSGEIPPSLT SLTELKHLEL TENGISGEIP
201: ADFGSLKMLS RVLLGRNELA GSIPGSISGM KRLADLDLSR NHIEGPIPEW MGNMKVLSVL NLDSNSLTGQ IPGSILSNSG FGVLNLSRNA LEGSIPDVFG
301: STTYFMSLDL SHNNLSGRIP DSLSSAKFVG HLDISHNRLC GPIPMGSPFD HLEASSFSDN ECLCGGPLMK TC
101: SIDPAVCDLT ALSSFVLADW KGISGEIPTC ITSLASLRVI DLAGNKITGE IPAEIGKLTK LAVLNLAENR MSGEIPPSLT SLTELKHLEL TENGISGEIP
201: ADFGSLKMLS RVLLGRNELA GSIPGSISGM KRLADLDLSR NHIEGPIPEW MGNMKVLSVL NLDSNSLTGQ IPGSILSNSG FGVLNLSRNA LEGSIPDVFG
301: STTYFMSLDL SHNNLSGRIP DSLSSAKFVG HLDISHNRLC GPIPMGSPFD HLEASSFSDN ECLCGGPLMK TC
001: MRKLLASPFS SLLAVVFISV ISVVRCCSPK DQTALNAFKS SLSEPNLGIF NTWSENTDCC KEWYGISCDP DSGRVTDISL RGESEDAIFQ KAGRSGYMSG
101: SIDPAVCDLT ALTSLVLADW KGITGEIPPC ITSLASLRIL DLAGNKITGE IPAEIGKLSK LAVLNLAENQ MSGEIPASLT SLIELKHLEL TENGITGVIP
201: ADFGSLKMLS RVLLGRNELT GSIPESISGM ERLADLDLSK NHIEGPIPEW MGNMKVLSLL NLDCNSLTGP IPGSLLSNSG LDVANLSRNA LEGTIPDVFG
301: SKTYLVSLDL SHNSLSGRIP DSLSSAKFVG HLDISHNKLC GRIPTGFPFD HLEATSFSDN QCLCGGPLTT SC
101: SIDPAVCDLT ALTSLVLADW KGITGEIPPC ITSLASLRIL DLAGNKITGE IPAEIGKLSK LAVLNLAENQ MSGEIPASLT SLIELKHLEL TENGITGVIP
201: ADFGSLKMLS RVLLGRNELT GSIPESISGM ERLADLDLSK NHIEGPIPEW MGNMKVLSLL NLDCNSLTGP IPGSLLSNSG LDVANLSRNA LEGTIPDVFG
301: SKTYLVSLDL SHNSLSGRIP DSLSSAKFVG HLDISHNKLC GRIPTGFPFD HLEATSFSDN QCLCGGPLTT SC
Arabidopsis Description
DRT100DRT100 [Source:UniProtKB/TrEMBL;Acc:A0A178VMS3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.