Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008869.1-P | Field mustard | extracellular, plasma membrane | 98.66 | 98.66 |
| CDY69775 | Canola | extracellular, plasma membrane | 95.19 | 94.43 |
| CDY69275 | Canola | extracellular | 89.04 | 89.04 |
| CDY53975 | Canola | extracellular | 87.7 | 87.94 |
| CDX91155 | Canola | extracellular | 75.4 | 81.5 |
| AT5G12940.1 | Thale cress | extracellular | 79.95 | 80.59 |
| CDX85681 | Canola | extracellular | 73.26 | 79.42 |
| CDY19601 | Canola | extracellular | 62.3 | 63.84 |
| CDY60388 | Canola | extracellular | 62.3 | 63.84 |
| VIT_06s0004g01750.t01 | Wine grape | extracellular | 62.03 | 63.74 |
| CDY27559 | Canola | extracellular | 62.03 | 63.56 |
| CDY06385 | Canola | extracellular | 61.5 | 63.01 |
| KRH23157 | Soybean | nucleus | 60.7 | 61.68 |
| PGSC0003DMT400003166 | Potato | extracellular, vacuole | 58.82 | 60.44 |
| Solyc11g056680.1.1 | Tomato | extracellular | 58.82 | 60.44 |
| GSMUA_Achr10P... | Banana | cytosol | 41.71 | 56.73 |
| GSMUA_Achr4P01520_001 | Banana | cytosol | 41.18 | 56.0 |
| CDX73812 | Canola | endoplasmic reticulum, extracellular, vacuole | 55.35 | 55.65 |
| CDY00787 | Canola | endoplasmic reticulum, extracellular, vacuole | 54.55 | 54.84 |
| CDY50534 | Canola | extracellular, vacuole | 53.74 | 53.89 |
| CDY52664 | Canola | extracellular | 53.74 | 53.89 |
| KRH24680 | Soybean | extracellular | 52.41 | 53.7 |
| GSMUA_Achr3P03820_001 | Banana | endoplasmic reticulum, extracellular | 51.87 | 52.15 |
| Os08t0505900-01 | Rice | extracellular | 52.94 | 52.11 |
| TraesCS7D01G243300.1 | Wheat | extracellular | 52.67 | 51.84 |
| TraesCS7B01G146800.1 | Wheat | extracellular | 52.41 | 51.58 |
| TraesCS7A01G244600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 52.41 | 51.58 |
| HORVU7Hr1G050110.1 | Barley | vacuole | 51.87 | 50.0 |
| KRH29680 | Soybean | endoplasmic reticulum | 51.6 | 49.87 |
| HORVU7Hr1G050140.1 | Barley | plastid | 51.87 | 49.74 |
| Zm00001d031434_P001 | Maize | extracellular | 49.73 | 48.82 |
| KRH24681 | Soybean | extracellular | 45.99 | 48.45 |
| EES14271 | Sorghum | cytosol | 51.34 | 47.88 |
| CDY08451 | Canola | endoplasmic reticulum, extracellular | 28.61 | 32.82 |
| CDY42127 | Canola | extracellular | 28.07 | 32.21 |
| CDX70057 | Canola | extracellular | 28.07 | 31.25 |
| CDY08448 | Canola | extracellular | 27.27 | 31.19 |
| CDY58884 | Canola | extracellular | 27.54 | 31.12 |
| CDY42131 | Canola | extracellular | 26.74 | 30.96 |
| CDX98967 | Canola | extracellular | 27.54 | 30.65 |
| CDY42130 | Canola | extracellular | 26.74 | 30.58 |
| CDX70059 | Canola | extracellular | 27.27 | 30.54 |
| CDY14065 | Canola | extracellular | 26.2 | 30.25 |
| CDX98966 | Canola | extracellular | 27.01 | 30.24 |
| CDY58887 | Canola | extracellular | 26.47 | 30.0 |
| CDX70058 | Canola | extracellular | 26.74 | 29.94 |
| CDY05006 | Canola | extracellular | 25.94 | 29.94 |
| CDY42129 | Canola | cytosol | 25.94 | 29.94 |
| CDY52623 | Canola | extracellular, vacuole | 25.94 | 29.85 |
| CDY08450 | Canola | extracellular | 25.67 | 29.72 |
| CDY58888 | Canola | extracellular | 27.01 | 29.53 |
| CDX98965 | Canola | extracellular | 26.2 | 29.52 |
| CDX70060 | Canola | extracellular | 26.2 | 29.52 |
| CDY50569 | Canola | extracellular, vacuole | 25.4 | 29.23 |
| CDY58889 | Canola | extracellular | 26.2 | 28.24 |
| CDX81023 | Canola | extracellular | 25.67 | 28.07 |
| CDX93759 | Canola | endoplasmic reticulum, extracellular, vacuole | 11.5 | 26.38 |
| CDX98968 | Canola | endoplasmic reticulum, extracellular, vacuole | 25.4 | 24.68 |
| CDY15279 | Canola | plastid | 28.07 | 24.65 |
| CDY40923 | Canola | extracellular, vacuole | 29.95 | 23.88 |
| CDX70056 | Canola | extracellular | 25.13 | 23.21 |
| CDX88024 | Canola | extracellular, vacuole | 35.83 | 22.83 |
| CDY64876 | Canola | extracellular, vacuole | 35.29 | 22.64 |
| CDX80361 | Canola | extracellular, vacuole | 35.29 | 22.49 |
| CDY38783 | Canola | extracellular | 23.53 | 21.46 |
| CDY16850 | Canola | plastid | 28.34 | 21.41 |
| CDY11623 | Canola | extracellular | 23.8 | 21.29 |
| CDX93758 | Canola | plastid | 13.64 | 19.84 |
| CDX81022 | Canola | extracellular, plasma membrane | 22.46 | 16.6 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A078JLF2 | EnsemblPlants:CDY68308 | ProteinID:CDY68308 | ProteinID:CDY68308.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00072812001 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PFAM:PF00560 | PFAM:PF08263 | PFscan:PS51257 |
| PANTHER:PTHR44401 | PANTHER:PTHR44401:SF2 | SUPFAM:SSF52058 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EE8BFA |
| SEG:seg | : | : | : | : | : |
Description
BnaA10g30080DBnaA10g30080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JLF2]
Coordinates
chrLK037147:+:196..1320
Molecular Weight (calculated)
39985.6 Da
IEP (calculated)
10.148
GRAVY (calculated)
0.223
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDAKKALVI VLINVVVLLL AGAPTVVQAC LPSERAALLE FRSKLNEPYI GVFKTWKGQD CCKGWYGVSC DPKSRRVSGI TLRGVSEEPI FQRAKRKGFM
101: TGTISPAICK LTHLSGIIIA DWEGISGVIP SCVTNLLAMR HLDLVGNKIS GVIPASIGKL MKLRVLNLAD NKLSGGIPPS ITRLTMLAHL DLMNNNLYGV
201: IPGDIGRLKM LSRVLLTGNK LSGQIPESLT RIYRLADLEL GMNRITGTIP ASMGKMSVLA TLNLDGNLIS GAIPGTLMNS SISNLNLSGN LLAGKIPNTF
301: GPRSYFTVLD LSNNRLQGAI PGSITTASFI GHLDVSHNHL CGKIPTGSPF DHLEATSFAY NSCLCGKPLG KCRK
101: TGTISPAICK LTHLSGIIIA DWEGISGVIP SCVTNLLAMR HLDLVGNKIS GVIPASIGKL MKLRVLNLAD NKLSGGIPPS ITRLTMLAHL DLMNNNLYGV
201: IPGDIGRLKM LSRVLLTGNK LSGQIPESLT RIYRLADLEL GMNRITGTIP ASMGKMSVLA TLNLDGNLIS GAIPGTLMNS SISNLNLSGN LLAGKIPNTF
301: GPRSYFTVLD LSNNRLQGAI PGSITTASFI GHLDVSHNHL CGKIPTGSPF DHLEATSFAY NSCLCGKPLG KCRK
001: MDTKKSLVIL LTNVVVFLLL STTVHSCLPS DRAALLEFRA KLNEPYIGVF NTWKGLDCCK GWYGVSCDPN TRRVAGITLR GESEDPLFQK AKRSGLMTGS
101: ISPSICKLTR LSGIIIADWK GISGVIPSCI ENLPFLRHLD LVGNKFSGVI PANIGKLLRL KVLNLADNHL YGVIPPSITR LVSLSHLDLR NNNISGVIPR
201: DIGRLKMVSR VLLSGNKISG QIPDSLTRIY RLADLELSMN RLTGPIPASF GKMSVLATLN LDGNLISGMI PGSLLASSIS NLNLSGNLIT GSIPNTFGPR
301: SYFTVLDLAN NRLQGPIPAS ITAASFIGHL DVSHNHLCGK IPMGSPFDHL DATSFAYNAC LCGKPLGNCK K
101: ISPSICKLTR LSGIIIADWK GISGVIPSCI ENLPFLRHLD LVGNKFSGVI PANIGKLLRL KVLNLADNHL YGVIPPSITR LVSLSHLDLR NNNISGVIPR
201: DIGRLKMVSR VLLSGNKISG QIPDSLTRIY RLADLELSMN RLTGPIPASF GKMSVLATLN LDGNLISGMI PGSLLASSIS NLNLSGNLIT GSIPNTFGPR
301: SYFTVLDLAN NRLQGPIPAS ITAASFIGHL DVSHNHLCGK IPMGSPFDHL DATSFAYNAC LCGKPLGNCK K
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LXU5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.