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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016239.1-P Field mustard cytosol 61.95 98.45
CDY11623 Canola extracellular 94.88 93.06
CDX93759 Canola endoplasmic reticulum, extracellular, vacuole 27.07 68.1
CDX93758 Canola plastid 40.24 64.2
CDY40923 Canola extracellular, vacuole 66.59 58.21
CDY15279 Canola plastid 57.07 54.93
AT1G33670.1 Thale cress extracellular 60.73 54.73
PGSC0003DMT400043544 Potato extracellular 52.93 45.4
Solyc10g052880.1.1 Tomato extracellular 51.71 44.35
KRH56366 Soybean nucleus 52.44 43.97
CDY52623 Canola extracellular, vacuole 21.22 26.77
CDY50569 Canola extracellular, vacuole 21.22 26.77
CDY42127 Canola extracellular 21.22 26.69
CDY08451 Canola endoplasmic reticulum, extracellular 20.98 26.38
CDY42131 Canola extracellular 20.73 26.32
CDY42130 Canola extracellular 20.73 25.99
CDY08448 Canola extracellular 20.49 25.69
CDX70060 Canola extracellular 20.73 25.6
CDY58887 Canola extracellular 20.49 25.45
CDX91155 Canola extracellular 21.46 25.43
CDY08450 Canola extracellular 20.0 25.39
CDY58884 Canola extracellular 20.49 25.38
CDY14065 Canola extracellular 20.0 25.31
CDY05006 Canola extracellular 20.0 25.31
CDX98965 Canola extracellular 20.49 25.3
CDY42129 Canola cytosol 19.76 25.0
CDY53975 Canola extracellular 22.68 24.93
CDY60388 Canola extracellular 22.2 24.93
CDY19601 Canola extracellular 22.2 24.93
CDY27559 Canola extracellular 22.2 24.93
CDX85681 Canola extracellular 20.98 24.93
CDX70058 Canola extracellular 20.24 24.85
CDY50534 Canola extracellular, vacuole 22.44 24.66
CDY06385 Canola extracellular 21.95 24.66
CDY58888 Canola extracellular 20.49 24.56
CDX98967 Canola extracellular 20.0 24.4
CDX70057 Canola extracellular 20.0 24.4
CDY52664 Canola extracellular 22.2 24.4
CDY64876 Canola extracellular, vacuole 34.63 24.36
CDY69275 Canola extracellular 21.95 24.06
CDX81023 Canola extracellular 20.0 23.98
CDX98966 Canola extracellular 19.51 23.95
CDY00787 Canola endoplasmic reticulum, extracellular, vacuole 21.71 23.92
CDX73812 Canola endoplasmic reticulum, extracellular, vacuole 21.71 23.92
CDX80361 Canola extracellular, vacuole 34.15 23.85
CDX88024 Canola extracellular, vacuole 33.9 23.68
CDX70059 Canola extracellular 19.27 23.65
CDY58889 Canola extracellular 20.0 23.63
CDY69775 Canola extracellular, plasma membrane 21.71 23.61
CDY68308 Canola extracellular 21.46 23.53
CDY16850 Canola plastid 27.8 23.03
VIT_18s0089g00010.t01 Wine grape plasma membrane 52.93 22.72
CDX98968 Canola endoplasmic reticulum, extracellular, vacuole 20.98 22.34
CDX70056 Canola extracellular 21.22 21.48
CDX81022 Canola extracellular, plasma membrane 17.56 14.23
Protein Annotations
EnsemblPlants:CDY38783EnsemblPlantsGene:GSBRNA2T00066582001Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPANTHER:PTHR45271
PFAM:PF08263PFAM:PF13855ProteinID:CDY38783ProteinID:CDY38783.1SEG:segSignalP:SignalP-noTM
SUPFAM:SSF52058UniParc:UPI0004EE7D76UniProt:A0A078HPP9MapMan:35.1::
Description
BnaA07g28550DBnaA07g28550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HPP9]
Coordinates
chrLK032432:-:214881..216251
Molecular Weight (calculated)
44842.6 Da
IEP (calculated)
9.003
GRAVY (calculated)
0.132
Length
410 amino acids
Sequence
(BLAST)
001: MNSSCLFTTF IFAAVISLGC LRSTGAATCH PDDEAGLLSF KAGITEDPLG ILSSWKKGTD CCSWFGVICI TGDRVTELRI LGSSVLGVGF LSGTISPSLA
101: KLEHLETLSF TNLLNITGPF PQFLFRLPKL RYVTIRDNRL SGPLPVNIGS LSELELGLID LSRNGLYGKL PPSMESLAHT LTSLYLSQNN LSGTIPDYFS
201: EFKALATFDL SRNRFTGVVP MSFAKLKSLF HLKLSHNFLT GPLPALNPVN GIASLDLSYN RFHLKTIPQW VTSSPSMYDL KLVKCGIEMN IEEWEPVRTG
301: LFYIVDLSKN DISGSPARFL NRADVLQEFR ASGNKLRFDL GKLNFTKSLR ILDLSRNLVY GKVPASVAGL RKLSLSQNNL CGRLPVTKFP ASVFAGNDCL
401: CGSPLPPCKT
Best Arabidopsis Sequence Match ( AT1G33612.1 )
(BLAST)
001: MNSCSFNLFI LGAIIFLRCF RSTGAATCDP DDEAGLLGFK SGITKDPSGI LSSWKKGTDC CFWSGVFCVN NDRVTQLSVD GDFSLDGNSP SGTISPMLAK
101: LQHLERILLT SLRKITGPFP QFIFRLPKLN YINIQGCLLS GPLPANIGEL SQLKTLVIDG NMFTGHIPSS IANLTRLTWL NLGNNRLSGT IPNIFKSMKE
201: LNSLDLSRNG FFGRLPPSIA SLAPTLYYLD LSQNNLSGTI PNYLSRFEAL STLVLSKNKY SGVVPMSFTN LINITNLDLS HNLLTGPFPV LKSINGIESL
301: DLSYNKFHLK TIPKWMISSP SIYSLKLAKC GLKISLDDWK LAGTYYYDSI DLSENEISGS PAKFLSQMKY LMEFRAAGNK LRFDLGKLTF VRTLETLDLS
401: RNLIFGRVLA TFAGLKTMNV SQNHLCGKLP VTKFPASXFA GNDCLCGSPL SPCKV
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4HR92]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.