Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034774.1-P | Field mustard | extracellular | 98.16 | 98.16 |
| CDY42127 | Canola | extracellular | 95.09 | 95.09 |
| CDY50569 | Canola | extracellular, vacuole | 74.23 | 74.46 |
| CDY52623 | Canola | extracellular, vacuole | 73.62 | 73.85 |
| CDY42130 | Canola | extracellular | 69.63 | 69.42 |
| CDY08450 | Canola | extracellular | 68.71 | 69.35 |
| CDY42131 | Canola | extracellular | 68.4 | 69.04 |
| CDY08448 | Canola | extracellular | 68.1 | 67.89 |
| CDY42129 | Canola | cytosol | 64.11 | 64.51 |
| CDY05006 | Canola | extracellular | 60.12 | 60.49 |
| CDY14065 | Canola | extracellular | 58.28 | 58.64 |
| CDX70058 | Canola | extracellular | 50.61 | 49.4 |
| CDX98965 | Canola | extracellular | 50.31 | 49.4 |
| CDY58884 | Canola | extracellular | 50.0 | 49.24 |
| CDX70059 | Canola | extracellular | 50.0 | 48.8 |
| CDY58887 | Canola | extracellular | 49.08 | 48.48 |
| CDX98967 | Canola | extracellular | 49.39 | 47.92 |
| CDX98966 | Canola | extracellular | 49.08 | 47.9 |
| CDX70060 | Canola | extracellular | 48.77 | 47.89 |
| CDX70057 | Canola | extracellular | 49.08 | 47.62 |
| CDY58888 | Canola | extracellular | 49.08 | 46.78 |
| CDX81023 | Canola | extracellular | 48.16 | 45.91 |
| CDY58889 | Canola | extracellular | 47.55 | 44.67 |
| CDX98968 | Canola | endoplasmic reticulum, extracellular, vacuole | 49.39 | 41.82 |
| CDX70056 | Canola | extracellular | 48.77 | 39.26 |
| CDX85681 | Canola | extracellular | 33.44 | 31.59 |
| CDX91155 | Canola | extracellular | 33.13 | 31.21 |
| CDY60388 | Canola | extracellular | 34.36 | 30.68 |
| CDY19601 | Canola | extracellular | 33.74 | 30.14 |
| CDY06385 | Canola | extracellular | 33.74 | 30.14 |
| CDY27559 | Canola | extracellular | 33.13 | 29.59 |
| CDX73812 | Canola | endoplasmic reticulum, extracellular, vacuole | 33.74 | 29.57 |
| CDY00787 | Canola | endoplasmic reticulum, extracellular, vacuole | 33.74 | 29.57 |
| CDY52664 | Canola | extracellular | 33.44 | 29.22 |
| CDY50534 | Canola | extracellular, vacuole | 33.13 | 28.95 |
| CDY53975 | Canola | extracellular | 32.82 | 28.69 |
| CDY68308 | Canola | extracellular | 32.82 | 28.61 |
| CDY69775 | Canola | extracellular, plasma membrane | 32.82 | 28.38 |
| CDY69275 | Canola | extracellular | 32.52 | 28.34 |
| CDX81022 | Canola | extracellular, plasma membrane | 41.72 | 26.88 |
| CDY15279 | Canola | plastid | 27.61 | 21.13 |
| CDY38783 | Canola | extracellular | 26.38 | 20.98 |
| CDY40923 | Canola | extracellular, vacuole | 29.45 | 20.47 |
| CDY11623 | Canola | extracellular | 26.07 | 20.33 |
| CDX93758 | Canola | plastid | 15.64 | 19.84 |
| CDY64876 | Canola | extracellular, vacuole | 34.36 | 19.21 |
| CDX80361 | Canola | extracellular, vacuole | 34.05 | 18.91 |
| CDX88024 | Canola | extracellular, vacuole | 33.74 | 18.74 |
| CDX93759 | Canola | endoplasmic reticulum, extracellular, vacuole | 9.2 | 18.4 |
| CDY16850 | Canola | plastid | 25.77 | 16.97 |
Protein Annotations
| EnsemblPlants:CDY08451 | EnsemblPlantsGene:GSBRNA2T00000217001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PANTHER:PTHR44138 |
| PFAM:PF08263 | PFAM:PF13855 | PFscan:PS51257 | ProteinID:CDY08451 | ProteinID:CDY08451.1 | SignalP:SignalP-noTM |
| SUPFAM:SSF52058 | UniParc:UPI0004EE49A3 | UniProt:A0A078F4V9 | MapMan:26.8.3.4 | : | : |
Description
BnaA05g26870DBnaA05g26870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4V9]
Coordinates
chrLK031986:+:230551..231814
Molecular Weight (calculated)
36655.6 Da
IEP (calculated)
9.939
GRAVY (calculated)
-0.108
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLLLHLSIF FAILFISLPS SYSCNSIEKN ALLQIKKSFN NPRKFSSWNP QTDCCTTWSG VKCTNGRVTD LSLFSSKRYG QIPDQIGDLL ELRSLFLTYL
101: PHLTGNIPRT ITKLKNLEYL ILRHNNLSGL IPDNIGELKR LRFLDLSYNQ FTGPIPGSLS QMPMLETIIV EHNKLTGSIP NSFGSFVGEV PNLYLSNNKL
201: SGNIPESLSK NDFNGVFLSK NSFTGDGSMF FGRNKSTVSL DLSRNMFEFD LSKVQFARGI VDLDLSHNRI FGNLPRELIE LRGLKLFNVS HNRLCGKIPR
301: GGLLQSFKSY VFAHNRCLCG TPLKAC
101: PHLTGNIPRT ITKLKNLEYL ILRHNNLSGL IPDNIGELKR LRFLDLSYNQ FTGPIPGSLS QMPMLETIIV EHNKLTGSIP NSFGSFVGEV PNLYLSNNKL
201: SGNIPESLSK NDFNGVFLSK NSFTGDGSMF FGRNKSTVSL DLSRNMFEFD LSKVQFARGI VDLDLSHNRI FGNLPRELIE LRGLKLFNVS HNRLCGKIPR
301: GGLLQSFKSY VFAHNRCLCG TPLKAC
001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
Arabidopsis Description
FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.