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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009235.1-P Field mustard extracellular 99.1 99.1
CDX98966 Canola extracellular 96.41 96.41
CDX70058 Canola extracellular 84.13 84.13
CDX70057 Canola extracellular 82.63 82.14
CDX98967 Canola extracellular 81.14 80.65
CDX98965 Canola extracellular 77.54 78.01
CDX70060 Canola extracellular 76.65 77.11
AT5G06860.1 Thale cress extracellular 76.05 76.97
CDY58884 Canola extracellular 67.96 68.58
CDY58887 Canola extracellular 67.37 68.18
CDY58889 Canola extracellular 69.46 66.86
CDY58888 Canola extracellular 67.07 65.5
CDX81023 Canola extracellular 66.47 64.91
CDX98968 Canola endoplasmic reticulum, extracellular, vacuole 69.46 60.26
Solyc07g065090.1.1 Tomato extracellular 57.48 58.72
PGSC0003DMT400057136 Potato extracellular 57.19 58.23
VIT_08s0007g07690.t01 Wine grape extracellular 59.28 57.56
CDX70056 Canola extracellular 69.46 57.28
KRH12977 Soybean nucleus 55.69 54.87
CDY52623 Canola extracellular, vacuole 52.69 54.15
KRG95348 Soybean mitochondrion 56.89 54.13
CDY50569 Canola extracellular, vacuole 52.1 53.54
CDY05006 Canola extracellular 50.3 51.85
CDY14065 Canola extracellular 49.4 50.93
TraesCS3A01G459300.1 Wheat cytosol 22.46 50.68
CDY42127 Canola extracellular 49.1 50.31
CDY08451 Canola endoplasmic reticulum, extracellular 48.8 50.0
CDY42130 Canola extracellular 48.5 49.54
CDY08448 Canola extracellular 47.9 48.93
CDY42131 Canola extracellular 47.31 48.92
KRH12976 Soybean cytosol 53.59 48.12
CDY08450 Canola extracellular 46.41 47.99
GSMUA_Achr9P12430_001 Banana extracellular 43.11 47.68
TraesCS3A01G459200.1 Wheat extracellular 48.2 47.35
TraesCS3D01G451800.1 Wheat extracellular 47.9 47.06
CDY42129 Canola cytosol 45.21 46.6
TraesCS3B01G498900.1 Wheat extracellular 47.31 46.47
TraesCS3D01G451400.1 Wheat extracellular 46.71 46.02
TraesCS3A01G459000.1 Wheat extracellular 46.71 45.75
TraesCS3D01G451900.1 Wheat extracellular 46.41 45.72
EES17529 Sorghum extracellular 46.11 45.16
Zm00001d035753_P001 Maize extracellular 46.11 45.16
HORVU3Hr1G098730.2 Barley endoplasmic reticulum, extracellular, mitochondrion 48.2 45.1
HORVU3Hr1G098610.1 Barley extracellular 44.91 44.64
EES17528 Sorghum extracellular 44.31 43.66
TraesCS3D01G451500.1 Wheat extracellular 43.11 43.11
Os05t0104200-01 Rice extracellular 39.82 43.04
TraesCS7D01G200000.1 Wheat cytosol 40.12 42.81
TraesCS1A01G012600.1 Wheat extracellular 42.81 42.56
Zm00001d035756_P001 Maize vacuole 44.31 42.29
TraesCS1D01G010800.1 Wheat extracellular 42.52 42.14
TraesCS1B01G017300.1 Wheat extracellular 41.62 41.25
CDX81022 Canola extracellular, plasma membrane 62.28 41.11
Os05t0104150-01 Rice extracellular 41.92 40.94
TraesCS7B01G103900.1 Wheat extracellular 40.42 40.06
TraesCS2A01G470500.1 Wheat extracellular 41.02 40.06
TraesCS2D01G470400.1 Wheat extracellular 40.72 39.77
TraesCS2D01G470500.1 Wheat extracellular, vacuole 40.42 39.36
Os05t0104600-01 Rice extracellular 39.82 39.23
TraesCS2B01G493300.1 Wheat extracellular 40.42 39.13
TraesCS2B01G493200.1 Wheat endoplasmic reticulum, extracellular 39.82 38.89
HORVU2Hr1G106620.1 Barley extracellular 39.52 38.82
TraesCS2A01G470600.1 Wheat extracellular 38.62 38.17
HORVU1Hr1G002410.1 Barley endoplasmic reticulum, vacuole 41.62 37.77
EES17527 Sorghum extracellular, plastid 44.01 37.4
Os05t0104700-01 Rice extracellular 40.12 33.42
TraesCS7A01G197500.1 Wheat extracellular 16.47 30.05
CDX85681 Canola extracellular 29.94 28.99
CDX91155 Canola extracellular 29.94 28.9
CDY19601 Canola extracellular 31.44 28.77
CDY52664 Canola extracellular 32.04 28.69
CDY06385 Canola extracellular 30.84 28.22
CDY60388 Canola extracellular 30.84 28.22
CDY50534 Canola extracellular, vacuole 31.44 28.15
CDY27559 Canola extracellular 30.54 27.95
CDX73812 Canola endoplasmic reticulum, extracellular, vacuole 30.84 27.69
CDY00787 Canola endoplasmic reticulum, extracellular, vacuole 30.54 27.42
CDY53975 Canola extracellular 30.54 27.35
CDY69775 Canola extracellular, plasma membrane 30.84 27.32
CDY68308 Canola extracellular 30.54 27.27
CDY69275 Canola extracellular 30.24 27.01
CDY40923 Canola extracellular, vacuole 28.74 20.47
CDY15279 Canola plastid 26.05 20.42
CDX88024 Canola extracellular, vacuole 35.03 19.93
CDX80361 Canola extracellular, vacuole 35.03 19.93
CDY64876 Canola extracellular, vacuole 33.83 19.38
CDY38783 Canola extracellular 23.65 19.27
CDX93759 Canola endoplasmic reticulum, extracellular, vacuole 9.28 19.02
CDY11623 Canola extracellular 23.65 18.9
CDY16850 Canola plastid 27.25 18.38
CDX93758 Canola plastid 12.87 16.73
Protein Annotations
EnsemblPlants:CDX70059EnsemblPlantsGene:GSBRNA2T00136159001Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPANTHER:PTHR44138
PFAM:PF00560PFAM:PF08263ProteinID:CDX70059ProteinID:CDX70059.1SEG:segSignalP:SignalP-noTM
SUPFAM:SSF52058UniParc:UPI0004EE170AMapMan:26.8.3.4:::
Description
BnaA10g24080D
Coordinates
chrLK031790:-:2912986..2914253
Molecular Weight (calculated)
37598.2 Da
IEP (calculated)
8.876
GRAVY (calculated)
-0.128
Length
334 amino acids
Sequence
(BLAST)
001: MDNKIHSTLL FSLLFFITHL ANASSKDQCN QNDKKTLLKI KKSLNNPYHL ASWDPKSDCC AWNSLECDDA TVNRRVISLT IFSAQISGQI PPEVGDLPYL
101: QKLVFRKITN LTGQIPHTIT KLKYLRFLRL SWTNLTGPVP EFLSQLMDLA YLNLSFNYFS GSIPSSLSLL PKLSYVDLSR NKLTGTIPES FGSFSGEVPD
201: LFLSHNQLSG SIPKSLGNLD FNRIDFSRNR FIGDASMLFG ANKTTFSIDL SRNMFQFDLS RVEIPKTFGI LDLNHNGITG SIPVQWTETP FQIFNVSYNR
301: LCGRIPTGGK LQMFDSYAYF HNKCLCGAPL DSCK
Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)
001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
Arabidopsis Description
FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.