Factsheet for HORVU1Hr1G002410.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	endoplasmic reticulum
MultiLoc:	endoplasmic reticulum
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G010800.1	Wheat	extracellular	84.24	91.99
TraesCS1A01G012600.1	Wheat	extracellular	83.42	91.37
TraesCS1B01G017300.1	Wheat	extracellular	83.42	91.1
Zm00001d035756_P001	Maize	vacuole	58.97	62.0
Os05t0104150-01	Rice	extracellular	55.98	60.23
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	57.07	58.82
HORVU3Hr1G098610.1	Barley	extracellular	50.27	55.06
EES17527	Sorghum	extracellular, plastid	58.15	54.45
HORVU2Hr1G106620.1	Barley	extracellular	44.02	47.65
KRG95348	Soybean	mitochondrion	43.48	45.58
Bra005918.1-P	Field mustard	extracellular	25.27	45.37
Bra009234.1-P	Field mustard	extracellular	39.4	43.81
CDX70060	Canola	extracellular	39.4	43.67
GSMUA_Achr9P12430_001	Banana	extracellular	35.6	43.38
CDX98965	Canola	extracellular	38.86	43.07
Bra009237.1-P	Field mustard	extracellular	38.59	42.26
CDX70057	Canola	extracellular	38.59	42.26
CDX70058	Canola	extracellular	38.32	42.22
CDX98966	Canola	extracellular	38.32	42.22
CDY58884	Canola	extracellular	37.77	41.99
Bra009236.1-P	Field mustard	extracellular	38.04	41.92
CDY58887	Canola	extracellular	37.5	41.82
Bra005919.1-P	Field mustard	extracellular	37.5	41.69
CDX98967	Canola	extracellular	38.04	41.67
CDX70059	Canola	extracellular	37.77	41.62
AT5G06870.1	Thale cress	extracellular	37.23	41.52
AT5G06860.1	Thale cress	extracellular	37.23	41.52
Bra009235.1-P	Field mustard	extracellular	37.5	41.32
PGSC0003DMT400021883	Potato	extracellular	37.5	41.32
Solyc09g014590.2.1	Tomato	extracellular	34.51	40.71
Bra009238.1-P	Field mustard	extracellular	36.68	40.66
CDX81023	Canola	extracellular	37.77	40.64
VIT_13s0064g01370.t01	Wine grape	extracellular	36.41	40.36
CDY58888	Canola	extracellular	37.23	40.06
Bra005917.1-P	Field mustard	extracellular	37.23	40.06
Solyc09g014480.1.1	Tomato	extracellular	36.14	39.7
HORVU2Hr1G082160.1	Barley	cytosol	33.42	39.55
KRH12976	Soybean	cytosol	39.95	39.52
Bra005916.1-P	Field mustard	extracellular	36.68	38.9
KRH12977	Soybean	nucleus	35.6	38.64
HORVU2Hr1G038990.1	Barley	plastid	38.04	38.36
CDY58889	Canola	extracellular	35.87	38.04
HORVU2Hr1G082140.1	Barley	extracellular	32.88	36.78
HORVU7Hr1G038570.1	Barley	mitochondrion	29.89	36.67
HORVU5Hr1G073500.1	Barley	extracellular, vacuole	33.97	35.71
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	37.23	35.58
CDX70056	Canola	extracellular	36.68	33.33
HORVU7Hr1G050110.1	Barley	vacuole	29.08	27.58
HORVU7Hr1G050140.1	Barley	plastid	29.08	27.44
CDX81022	Canola	extracellular, plasma membrane	32.34	23.52
HORVU2Hr1G119550.1	Barley	cytosol	16.85	17.66

Protein Annotations

EnsemblPlants:HORVU1Hr1G002410.1	EnsemblPlantsGene:HORVU1Hr1G002410	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138
PFAM:PF00560	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	UniParc:UPI000B4636D0
UniProt:A0A287EGE7	MapMan:26.8.3.4	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:4762948..4764312

Molecular Weight (calculated)

39431.9 Da

IEP (calculated)

5.651

GRAVY (calculated)

0.134

Length

368 amino acids

Sequence
(BLAST)

001: HSSRTSSVSL VSSNTPDTQQ ERVHLDCLKK MAGASPLHLL LSFLLLVLMA AADQCHDDDH AALVAIDTAL GSPYHFASWT PDSACCDWYD VDCDADTGRV
101: VGLRVYQDTN MSGIIPDAIA NLTFLETLTL HHLPAISGAI PDSLVALSNL SELTISYTGV SGPVPSFLGA LTALTLLDLS YNSLAGVIPP SLADLINLSS
201: INLRRNRLSG AIPSLLLSKS PDGAYLQLSH NNLSGIIPTE FATVNFSYVD LSRNTLSGDA TCLFGAQKAI QHLDVSRNAL NFDLSDVEFP EQLTYADLSH
301: NAIRGAIPAQ VATLDGLQQF NVSFNRLCGA VPTGGNMSRF GRYSYLHNKC LCGTPLTACR QRPVGYLH

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.