CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 5
cytosol 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035756_P001	Maize	vacuole	74.55	83.71
TraesCS1A01G012600.1	Wheat	extracellular	55.98	65.48
TraesCS1D01G010800.1	Wheat	extracellular	55.73	64.99
EES17528	Sorghum	extracellular	55.47	64.31
TraesCS1B01G017300.1	Wheat	extracellular	53.69	62.61
EES17529	Sorghum	extracellular	53.44	61.58
Os05t0104150-01	Rice	extracellular	51.4	59.06
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	54.45	58.15
Bra009234.1-P	Field mustard	extracellular	37.66	44.71
GSMUA_Achr9P12430_001	Banana	extracellular	34.35	44.7
CDX70058	Canola	extracellular	37.91	44.61
CDX70060	Canola	extracellular	37.66	44.58
Bra009236.1-P	Field mustard	extracellular	37.66	44.31
CDX98966	Canola	extracellular	37.66	44.31
AT5G06860.1	Thale cress	extracellular	37.15	44.24
CDX70059	Canola	extracellular	37.4	44.01
CDX98965	Canola	extracellular	37.15	43.98
Bra009237.1-P	Field mustard	extracellular	37.4	43.75
CDX70057	Canola	extracellular	37.4	43.75
Bra009235.1-P	Field mustard	extracellular	37.15	43.71
AT5G06870.1	Thale cress	extracellular	36.64	43.64
KRG95348	Soybean	mitochondrion	38.42	43.02
Bra005918.1-P	Field mustard	extracellular	22.39	42.93
VIT_13s0064g01370.t01	Wine grape	extracellular	36.13	42.77
CDY58887	Canola	extracellular	35.62	42.42
CDY58888	Canola	extracellular	36.9	42.4
Bra005917.1-P	Field mustard	extracellular	36.9	42.4
CDX98967	Canola	extracellular	36.13	42.26
CDX81023	Canola	extracellular	36.64	42.11
CDY58884	Canola	extracellular	35.37	41.99
Bra005919.1-P	Field mustard	extracellular	34.86	41.39
PGSC0003DMT400021883	Potato	extracellular	34.86	41.02
Bra009238.1-P	Field mustard	extracellular	34.61	40.96
Bra005916.1-P	Field mustard	extracellular	36.13	40.92
KRH12977	Soybean	nucleus	35.11	40.71
Solyc09g014480.1.1	Tomato	extracellular	34.61	40.6
EER99569	Sorghum	extracellular	34.35	40.54
CDY58889	Canola	extracellular	35.62	40.35
Solyc09g014590.2.1	Tomato	extracellular	31.3	39.42
EER94664	Sorghum	extracellular	28.24	39.36
EER99094	Sorghum	mitochondrion, vacuole	34.1	38.18
OQU81782	Sorghum	extracellular	33.33	38.08
KRH12976	Soybean	cytosol	34.61	36.56
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	35.11	35.84
CDX70056	Canola	extracellular	34.61	33.58
EES14271	Sorghum	cytosol	28.24	27.68
CDX81022	Canola	extracellular, plasma membrane	32.57	25.3
KXG27431	Sorghum	vacuole	27.48	20.61

Protein Annotations

MapMan:26.8.3.4	Gene3D:3.80.10.10	EntrezGene:8065282	UniProt:C5YXZ2	EnsemblPlants:EES17527	ProteinID:EES17527
ProteinID:EES17527.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019
PANTHER:PTHR44138	EnsemblPlantsGene:SORBI_3009G002400	SUPFAM:SSF52058	TMHMM:TMhelix	UniParc:UPI000B8B9DB4	RefSeq:XP_002439097.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:209718..211652

Molecular Weight (calculated)

41767.6 Da

IEP (calculated)

5.685

GRAVY (calculated)

0.070

Length

393 amino acids

Sequence
(BLAST)

001: MAAAASSSSQ QQIRPLVGAA AFLAVWCLVV GTARSSSSMQ MQCHEEDQEA LLAVNSALGS PYHFASWTPD TFCCDWYDVD CDNTTGRVVG LTVLGDGNLT
101: GAIPDAIANL TNLRTLVLRH LPGLTGNIPD SLALLSNLSQ LTISSTGVSG PVPEFLSQLT ELTMLDLSFN SFEGTIPASL ADLPSLSTID LSRNRLSGPV
201: PSLLLTKCCT DDQQAAYLRL SHNNFSGAIP AGFAAVSFAH LDLSRNAFTG DASGVLGKGK PLQHLDLSRN GFAFSLTAVE LPEQLSYMDL SHNAIRGRIP
301: AQVADLAGLQ LFNVSYNKMC GVVPTGGNMD KFDAYSYQHN KCLCGTPLPS CGHPLTTSHK IDTRGLRLSH VTSAHKPSDD VATYLVDFST LQC

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.