Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029583_P001 | Maize | extracellular | 85.82 | 85.21 |
| TraesCS7A01G189800.1 | Wheat | endoplasmic reticulum, extracellular | 78.01 | 78.01 |
| TraesCS7D01G190900.1 | Wheat | extracellular | 76.6 | 75.79 |
| HORVU7Hr1G038570.1 | Barley | mitochondrion | 78.01 | 73.33 |
| Os03t0436600-00 | Rice | endoplasmic reticulum | 81.21 | 69.6 |
| TraesCS7B01G094700.1 | Wheat | plastid | 79.08 | 64.45 |
| EES17528 | Sorghum | extracellular | 43.26 | 35.99 |
| EES17529 | Sorghum | extracellular | 42.91 | 35.48 |
| EER99094 | Sorghum | mitochondrion, vacuole | 40.07 | 32.19 |
| EER99569 | Sorghum | extracellular | 37.59 | 31.83 |
| OQU81782 | Sorghum | extracellular | 36.88 | 30.23 |
| EES17527 | Sorghum | extracellular, plastid | 39.36 | 28.24 |
| EES14271 | Sorghum | cytosol | 34.04 | 23.94 |
| KXG27431 | Sorghum | vacuole | 31.21 | 16.79 |
Protein Annotations
| EnsemblPlants:EER94664 | EnsemblPlantsGene:SORBI_3001G330500 | EntrezGene:8066260 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ |
| InterPro:LRR_dom_sf | PANTHER:PTHR44138 | PANTHER:PTHR44138:SF1 | PFAM:PF08263 | ProteinID:EER94664 | ProteinID:EER94664.1 |
| RefSeq:XP_002467666.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52058 | unigene:Sbi.8635 | UniParc:UPI0001A83191 |
| UniProt:C5WVM2 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:61805726..61807030
Molecular Weight (calculated)
29634.8 Da
IEP (calculated)
7.363
GRAVY (calculated)
0.238
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MELTRPHDSV AMLLAVLVVS AAVARSGGAL CDKSDKAALL AVKSALGNPP ALSGWNSTVA CCSWEGISCN ATTGRVTELT VFALNLSAPV PAAIANLTAL
101: QSVNLAYNQL YGSIPAFLGP RALPDLTFLR LDGNRLTGAI PPTATVFDLS LVGNLLTGPL PATFGGASFG DVDLADNQLT GDASMLFGAK KQLNALHLSR
201: NRFRFDLGGV ELPEAMDILE IDHNLVYGSI PAAAAARKWL AFDVSYNQLC GPIPQGRYTH RFGAKHFAGN KCLCDRPLPP CT
101: QSVNLAYNQL YGSIPAFLGP RALPDLTFLR LDGNRLTGAI PPTATVFDLS LVGNLLTGPL PATFGGASFG DVDLADNQLT GDASMLFGAK KQLNALHLSR
201: NRFRFDLGGV ELPEAMDILE IDHNLVYGSI PAAAAARKWL AFDVSYNQLC GPIPQGRYTH RFGAKHFAGN KCLCDRPLPP CT
001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
Arabidopsis Description
FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.