Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G190900.1 | Wheat | extracellular | 78.32 | 95.09 |
| TraesCS7A01G189800.1 | Wheat | endoplasmic reticulum, extracellular | 77.17 | 94.68 |
| HORVU7Hr1G038570.1 | Barley | mitochondrion | 78.9 | 91.0 |
| EER94664 | Sorghum | extracellular | 64.45 | 79.08 |
| Zm00001d029583_P001 | Maize | extracellular | 62.72 | 76.41 |
| Os03t0436600-00 | Rice | endoplasmic reticulum | 61.85 | 65.05 |
| TraesCS3B01G498900.1 | Wheat | extracellular | 35.26 | 35.88 |
| TraesCS2B01G493200.1 | Wheat | endoplasmic reticulum, extracellular | 35.26 | 35.67 |
| TraesCS2B01G493300.1 | Wheat | extracellular | 33.81 | 33.91 |
| TraesCS7B01G103900.1 | Wheat | extracellular | 32.37 | 33.23 |
| TraesCS5B01G265900.1 | Wheat | extracellular | 32.95 | 32.29 |
| TraesCS2B01G226900.1 | Wheat | extracellular | 29.77 | 30.84 |
| TraesCS2B01G353300.1 | Wheat | extracellular | 28.9 | 30.49 |
| TraesCS1B01G017300.1 | Wheat | extracellular | 29.48 | 30.27 |
| TraesCS7B01G146800.1 | Wheat | extracellular | 26.88 | 24.47 |
| TraesCS2B01G590900.1 | Wheat | extracellular | 25.72 | 19.91 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G094700.1 | EnsemblPlantsGene:TraesCS7B01G094700 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| PANTHER:PTHR44138 | PANTHER:PTHR44138:SF1 | PFAM:PF08263 | SEG:seg | SUPFAM:SSF52058 | MapMan:35.1 |
Description
No Description!
Coordinates
chr7B:-:108557627..108558667
Molecular Weight (calculated)
36483.0 Da
IEP (calculated)
9.050
GRAVY (calculated)
0.090
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MHVCHSAMAL RSTSDLGQQC TASSTPIYVV LSLHTPSLLP HNTKRPGQNQ LAQPPTRRST TMQLTSPCRH TMPFLVGVAV LVLAAAAARA DGALCDKSDK
101: AALLAVKSAL GNHPDLSGWN STAPCCAWPG ISCDATTGRV TELTVFALNI SAPVPAAIAN LTALQTVNLA YNRLYGRIPA FLGPRALPDL TFLRLDGNRL
201: DGPIPPTATV YDLSVAGNRL TGPLPAAFAG AEFGSVDVAD NQLTGDASVL FGAGKRVNSV RLSRNRFAFD LGRVELPGAL DILAVDHNMI YGGIPAAAAA
301: RRWLAFDVSY NNLCGPIPQG RYTHRFGPKH FAPNKCLCGR PLAPCG
101: AALLAVKSAL GNHPDLSGWN STAPCCAWPG ISCDATTGRV TELTVFALNI SAPVPAAIAN LTALQTVNLA YNRLYGRIPA FLGPRALPDL TFLRLDGNRL
201: DGPIPPTATV YDLSVAGNRL TGPLPAAFAG AEFGSVDVAD NQLTGDASVL FGAGKRVNSV RLSRNRFAFD LGRVELPGAL DILAVDHNMI YGGIPAAAAA
301: RRWLAFDVSY NNLCGPIPQG RYTHRFGPKH FAPNKCLCGR PLAPCG
001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
Arabidopsis Description
FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.