Factsheet for TraesCS5B01G265900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
mitochondrion 1
extracellular 5
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G266200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	86.4	96.21
HORVU5Hr1G073500.1	Barley	extracellular, vacuole	90.93	91.71
Os09t0491612-01	Rice	extracellular	70.25	72.51
EER99094	Sorghum	mitochondrion, vacuole	69.97	70.37
Zm00001d020944_P001	Maize	extracellular	67.71	70.09
GSMUA_Achr6P22250_001	Banana	extracellular	50.42	54.27
TraesCS2B01G226900.1	Wheat	extracellular	42.21	44.61
TraesCS3B01G498900.1	Wheat	extracellular	40.51	42.06
TraesCS2B01G353300.1	Wheat	extracellular	38.24	41.16
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	37.39	38.6
TraesCS7B01G103900.1	Wheat	extracellular	36.26	37.98
TraesCS1B01G017300.1	Wheat	extracellular	35.98	37.69
TraesCS2B01G493300.1	Wheat	extracellular	35.41	36.23
TraesCS7B01G094700.1	Wheat	plastid	32.29	32.95
TraesCS7B01G146800.1	Wheat	extracellular	31.73	29.47
TraesCS2B01G590900.1	Wheat	extracellular	30.88	24.38

Protein Annotations

EnsemblPlants:TraesCS5B01G265900.1	EnsemblPlantsGene:TraesCS5B01G265900	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138
PANTHER:PTHR44138:SF2	PFAM:PF00560	PFAM:PF08263	PFAM:PF13516	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52058	MapMan:26.8.3.4	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:450609651..450610712

Molecular Weight (calculated)

37403.0 Da

IEP (calculated)

4.743

GRAVY (calculated)

0.190

Length

353 amino acids

Sequence
(BLAST)

001: MRNTAGFVSL SAMAADLPSS SWHALLCLVL FSAVVASSSA MDCDGDDRAA LLRVKAQLGD PVQLSSWLPA TNCCAWEPPA VFCSATGRVT GLALSSLDGV
101: RAPVPPALGE LPELVILQVQ SVRGLSGPIP SSFGNLTRLE DLNIAGTSIS GPVPDFLAGL TSLRTLVIAD SKLAGPIPGC LRSLPDLRYL DLSGNMLTGA
201: IPPVLLHGSF RFLILANNQL TGEIPSDCGD DNVDTLDLSR NRLTGDPSPF LFGITKPVAK VDLSWNELEF DMSDVSFPHH LTFLDLSHNR INGSVAKSLM
301: DVKLEHFDVS YNGLCGEIPA GRFMSAHGAE SYEQNRCLCG TPLPPCTTGM LGR

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.