Factsheet for TraesCS5A01G266200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G265900.1	Wheat	extracellular	96.21	86.4
HORVU5Hr1G073500.1	Barley	extracellular, vacuole	93.38	84.57
Os09t0491612-01	Rice	extracellular	74.13	68.71
EER99094	Sorghum	mitochondrion, vacuole	73.82	66.67
Zm00001d020944_P001	Maize	extracellular	71.29	66.28
GSMUA_Achr6P22250_001	Banana	extracellular	52.05	50.3
TraesCS2A01G199600.1	Wheat	extracellular	44.48	42.09
TraesCS3A01G459200.1	Wheat	extracellular	41.64	38.82
TraesCS3A01G459300.1	Wheat	cytosol	17.98	38.51
TraesCS3A01G459000.1	Wheat	extracellular	40.38	37.54
TraesCS7A01G189800.1	Wheat	endoplasmic reticulum, extracellular	32.49	36.52
TraesCS1A01G012600.1	Wheat	extracellular	36.59	34.52
TraesCS2A01G470600.1	Wheat	extracellular	36.28	34.02
TraesCS2A01G470500.1	Wheat	extracellular	36.59	33.92
TraesCS7A01G197500.1	Wheat	extracellular	18.3	31.69
TraesCS7A01G244600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	32.49	27.11
TraesCS2A01G593600.1	Wheat	endoplasmic reticulum, extracellular	31.86	22.6

Protein Annotations

EnsemblPlants:TraesCS5A01G266200.1	EnsemblPlantsGene:TraesCS5A01G266200	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138
PANTHER:PTHR44138:SF2	PFAM:PF00560	PFAM:PF08263	PFAM:PF13516	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52058	MapMan:26.8.3.4	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:477814307..477815335

Molecular Weight (calculated)

33223.9 Da

IEP (calculated)

4.532

GRAVY (calculated)

0.227

Length

317 amino acids

Sequence
(BLAST)

001: MAADPPSSSW HALLCLALFS AVVASSSAMD CDGDDRAALL RVKAQLGDPV QLSSWLPATN CCAWEPPAVF CSAAGRVTGL ALSSLDGVRA PVPPALGELP
101: ELVILQVQSV RGLSGPIPSS FGNLTRLEDL NIAGTSISGP VPDFLAGLTS LRTLVIADGK LAGPMPGCLG SLPGLRYLDL SGNMLTGAIP PGLLHGSFRF
201: LILANNQLTG EIPSDCGDDD VDTLDLSRNR LTGDPSPFLF GIAKPLAKVD LSWNELEFDM SDVSFPHHLT FLDLSHNRIN GSVAKSLMDV KLEHLDVSYN
301: GLCGEIPAGR FMSAHGA

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.