Factsheet for TraesCS3A01G459000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G451400.1	Wheat	extracellular	88.56	89.09
TraesCS3A01G459200.1	Wheat	extracellular	85.63	85.88
TraesCS3B01G498900.1	Wheat	extracellular	84.75	85.0
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	87.98	84.03
TraesCS3A01G459300.1	Wheat	cytosol	35.78	82.43
EES17528	Sorghum	extracellular	65.69	66.08
TraesCS1A01G012600.1	Wheat	extracellular	56.01	56.85
TraesCS2A01G470500.1	Wheat	extracellular	49.56	49.42
TraesCS2A01G470600.1	Wheat	extracellular	46.92	47.34
CDX98966	Canola	extracellular	46.33	47.31
Bra009236.1-P	Field mustard	extracellular	46.04	47.01
CDX70058	Canola	extracellular	46.04	47.01
CDX98965	Canola	extracellular	45.75	46.99
Bra009234.1-P	Field mustard	extracellular	45.45	46.83
CDX70059	Canola	extracellular	45.75	46.71
CDX70060	Canola	extracellular	45.45	46.69
AT5G06860.1	Thale cress	extracellular	45.16	46.67
Bra009235.1-P	Field mustard	extracellular	45.45	46.41
TraesCS7A01G197500.1	Wheat	extracellular	24.63	45.9
Bra005918.1-P	Field mustard	extracellular	27.57	45.85
CDX70057	Canola	extracellular	45.16	45.83
Bra009237.1-P	Field mustard	extracellular	45.16	45.83
GSMUA_Achr9P12430_001	Banana	extracellular	40.47	45.7
CDX98967	Canola	extracellular	44.87	45.54
AT5G06870.1	Thale cress	extracellular	43.99	45.45
KRG95348	Soybean	mitochondrion	45.75	44.44
CDX81023	Canola	extracellular	44.57	44.44
VIT_13s0064g01370.t01	Wine grape	extracellular	42.82	43.98
Bra005917.1-P	Field mustard	extracellular	43.99	43.86
CDY58884	Canola	extracellular	42.52	43.81
Bra009238.1-P	Field mustard	extracellular	42.52	43.67
CDY58888	Canola	extracellular	43.7	43.57
Bra005919.1-P	Field mustard	extracellular	42.23	43.5
CDY58887	Canola	extracellular	41.94	43.33
TraesCS7A01G189800.1	Wheat	endoplasmic reticulum, extracellular	35.78	43.26
Solyc09g014590.2.1	Tomato	extracellular	39.3	42.95
PGSC0003DMT400021883	Potato	extracellular	41.35	42.22
Solyc09g014480.1.1	Tomato	extracellular	41.06	41.79
KRH12977	Soybean	nucleus	41.35	41.59
Bra005916.1-P	Field mustard	extracellular	41.35	40.63
TraesCS5A01G266200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	37.54	40.38
KRH12976	Soybean	cytosol	43.99	40.32
TraesCS2A01G199600.1	Wheat	extracellular	39.59	40.3
CDY58889	Canola	extracellular	40.76	40.06
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	42.52	37.66
CDX70056	Canola	extracellular	42.52	35.8
TraesCS7A01G244600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	32.26	28.95
TraesCS2A01G593600.1	Wheat	endoplasmic reticulum, extracellular	34.02	25.95
CDX81022	Canola	extracellular, plasma membrane	35.78	24.11

Protein Annotations

EnsemblPlants:TraesCS3A01G459000.1	EnsemblPlantsGene:TraesCS3A01G459000	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
PANTHER:PTHR44138	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	TMHMM:TMhelix
MapMan:26.8.3.4	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:695668427..695669652

Molecular Weight (calculated)

36511.2 Da

IEP (calculated)

8.167

GRAVY (calculated)

0.167

Length

341 amino acids

Sequence
(BLAST)

001: MRMHSHALLV LLFCSLLVLV GPANAEPSPD PTYKDCHPGD KAALLAVKAA LGEPYLLSGW IPDRPCCDWN GVSCDHFTGR VVSLAVFQDA NITGTIPSAL
101: AGLPHLQDLT LRHLPLLSGP IPPAIGKLSN LSSLRISWTA VSGPVPSFLG ALKKLTFLEP SFNSLTGAIP ASLGAIPNQS GINLSRNRLT GAIPMFLSKS
201: ADQVYLWLSH NNLTGPLPAG FAAVNFTHFD LSRNALTGDA SGLFGRGKEL QYMDLSRNDF NFDLSAVVLP EQIYTVDLSH TAIHGIIPAQ VASAANLNFF
301: NISYNRLCGR VPTGGNMARF DLYSFQHNKC LCGAPLPPCK K

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.