Factsheet for Bra009237.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70057	Canola	extracellular	99.4	99.4
Bra009236.1-P	Field mustard	extracellular	87.8	88.32
Bra009235.1-P	Field mustard	extracellular	82.44	82.93
Bra009234.1-P	Field mustard	extracellular	75.6	76.74
AT5G06860.1	Thale cress	extracellular	73.81	75.15
Bra005918.1-P	Field mustard	extracellular	42.56	69.76
Bra009238.1-P	Field mustard	extracellular	68.15	68.98
Bra005919.1-P	Field mustard	extracellular	67.26	68.28
Bra005916.1-P	Field mustard	extracellular	66.37	64.27
Bra005917.1-P	Field mustard	extracellular	65.18	64.04
PGSC0003DMT400057136	Potato	extracellular	55.95	57.32
Solyc07g065090.1.1	Tomato	extracellular	55.65	57.19
VIT_08s0007g07690.t01	Wine grape	extracellular	58.04	56.69
TraesCS3A01G459300.1	Wheat	cytosol	24.7	56.08
KRG95348	Soybean	mitochondrion	57.14	54.7
KRH12977	Soybean	nucleus	52.98	52.51
Bra038700.1-P	Field mustard	extracellular, vacuole	50.3	52.0
Bra034774.1-P	Field mustard	extracellular	48.21	49.69
Bra034773.1-P	Field mustard	cytosol	45.54	48.57
TraesCS3A01G459200.1	Wheat	extracellular	48.81	48.24
KRH12976	Soybean	cytosol	53.27	48.12
TraesCS3D01G451800.1	Wheat	extracellular	48.51	47.94
GSMUA_Achr9P12430_001	Banana	extracellular	42.86	47.68
TraesCS3B01G498900.1	Wheat	extracellular	47.62	47.06
Zm00001d035753_P001	Maize	extracellular	47.32	46.63
TraesCS3D01G451900.1	Wheat	extracellular	47.02	46.61
TraesCS3D01G451400.1	Wheat	extracellular	46.73	46.31
EES17529	Sorghum	extracellular	46.73	46.04
EES17528	Sorghum	extracellular	46.13	45.72
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	48.51	45.66
Os05t0104200-01	Rice	extracellular	41.96	45.63
HORVU3Hr1G098610.1	Barley	extracellular	45.24	45.24
TraesCS3A01G459000.1	Wheat	extracellular	45.83	45.16
TraesCS3D01G451500.1	Wheat	extracellular	44.64	44.91
TraesCS7D01G200000.1	Wheat	cytosol	40.77	43.77
Zm00001d035756_P001	Maize	vacuole	45.54	43.71
TraesCS1A01G012600.1	Wheat	extracellular	43.45	43.45
TraesCS1D01G010800.1	Wheat	extracellular	43.15	43.03
Os05t0104150-01	Rice	extracellular	42.86	42.11
TraesCS1B01G017300.1	Wheat	extracellular	41.96	41.84
Os05t0104600-01	Rice	extracellular	41.96	41.59
TraesCS7B01G103900.1	Wheat	extracellular	41.67	41.54
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	41.67	40.94
TraesCS2D01G470400.1	Wheat	extracellular	41.37	40.64
TraesCS2A01G470500.1	Wheat	extracellular	41.37	40.64
HORVU2Hr1G106620.1	Barley	extracellular	41.07	40.59
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	41.37	40.52
TraesCS2B01G493300.1	Wheat	extracellular	41.07	40.0
TraesCS2A01G470600.1	Wheat	extracellular	39.58	39.35
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	42.26	38.59
EES17527	Sorghum	extracellular, plastid	43.75	37.4
Os05t0104700-01	Rice	extracellular	43.45	36.41
TraesCS7A01G197500.1	Wheat	extracellular	16.96	31.15
Bra023383.1-P	Field mustard	extracellular	31.25	30.26
Bra035741.1-P	Field mustard	extracellular	32.14	29.59
Bra008869.1-P	Field mustard	extracellular, plasma membrane	31.55	28.34
Bra023925.1-P	Field mustard	extracellular	31.55	28.19
Bra038737.1-P	Field mustard	endoplasmic reticulum, extracellular	31.25	28.15
Bra001460.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	30.95	27.96
Bra008870.1-P	Field mustard	extracellular	30.36	27.35
Bra010209.1-P	Field mustard	extracellular	31.25	21.97
Bra028006.1-P	Field mustard	endoplasmic reticulum, vacuole	31.25	21.92
Bra009680.1-P	Field mustard	extracellular, vacuole	35.42	20.27
Bra026499.1-P	Field mustard	plastid	28.57	19.39
Bra016239.1-P	Field mustard	cytosol	13.1	17.05

Protein Annotations

MapMan:26.8.3.4	Gene3D:3.80.10.10	ProteinID:ACP28177	ProteinID:ACP28177.1	EnsemblPlantsGene:Bra009237	EnsemblPlants:Bra009237.1
EnsemblPlants:Bra009237.1-P	EMBL:FJ898287	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_4	UniProt:M4CYE0
PFAM:PF08263	PFAM:PF12799	PFscan:PS51450	PANTHER:PTHR44138	SUPFAM:SSF52058	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002545395	SEG:seg	:	:	:

Description

AT5G06860 (E=5e-136) PGIP1, ATPGIP1 | PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding

Coordinates

chrA10:+:15771534..15772694

Molecular Weight (calculated)

37540.2 Da

IEP (calculated)

7.959

GRAVY (calculated)

-0.015

Length

336 amino acids

Sequence
(BLAST)

001: MDHKTNTTLL FSLLFFITYL ITIATSKDLC NQNDKNTLLK IKKSLNNPYH LASWHPETDC CSWYCLECGD ATVNHRVISL TIFAGQISGQ LPPEVGDLPY
101: LQSLMFHRIT NITGQIPSTI TKLKYLRSLR LSWLNLSGPV PEFLSQLMNL EYLSLSFNQL SGSIPSSLAL LPKLSYVDLS RNKLTGTIPE SFGSFPAELA
201: YLILSHNQLS GSIPKSLGNL DFNRIDFSRN KFTGDASMLF GANKTTFSID LSRNIFQFDL SRVVLHESLG VLDLNHNGIT GSIPVQWTEY SLQILNVSYN
301: RLCGPIPTGG SLQRFDSYTY FHNKCLCGAP LDSSCK

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.