Factsheet for TraesCS1D01G010800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G012600.1	Wheat	extracellular	95.25	95.54
TraesCS1B01G017300.1	Wheat	extracellular	91.39	91.39
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	91.99	84.24
Zm00001d035756_P001	Maize	vacuole	65.28	62.86
TraesCS3D01G451800.1	Wheat	extracellular	61.13	60.59
Os05t0104150-01	Rice	extracellular	60.24	59.36
TraesCS3D01G451900.1	Wheat	extracellular	58.16	57.82
TraesCS3D01G451500.1	Wheat	extracellular	56.97	57.48
TraesCS3D01G451400.1	Wheat	extracellular	57.57	57.23
TraesCS7D01G200000.1	Wheat	cytosol	51.93	55.91
EES17527	Sorghum	extracellular, plastid	64.99	55.73
TraesCS2D01G470400.1	Wheat	extracellular	49.55	48.83
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	47.77	46.94
KRG95348	Soybean	mitochondrion	48.37	46.44
Bra005918.1-P	Field mustard	extracellular	27.89	45.85
Bra009234.1-P	Field mustard	extracellular	43.62	44.41
CDX70060	Canola	extracellular	43.62	44.28
GSMUA_Achr9P12430_001	Banana	extracellular	39.47	44.04
CDY58887	Canola	extracellular	42.73	43.64
CDY58884	Canola	extracellular	42.73	43.5
CDX98965	Canola	extracellular	42.73	43.37
Bra005919.1-P	Field mustard	extracellular	42.43	43.2
CDX70057	Canola	extracellular	43.03	43.15
Bra009237.1-P	Field mustard	extracellular	43.03	43.15
CDX70058	Canola	extracellular	42.73	43.11
CDX98966	Canola	extracellular	42.43	42.81
Bra009236.1-P	Field mustard	extracellular	42.43	42.81
AT5G06870.1	Thale cress	extracellular	41.84	42.73
CDX98967	Canola	extracellular	42.43	42.56
CDX70059	Canola	extracellular	42.14	42.52
AT5G06860.1	Thale cress	extracellular	41.54	42.42
CDX81023	Canola	extracellular	43.03	42.4
Bra009235.1-P	Field mustard	extracellular	41.84	42.22
CDY58888	Canola	extracellular	42.43	41.81
Bra005917.1-P	Field mustard	extracellular	42.43	41.81
PGSC0003DMT400021883	Potato	extracellular	40.95	41.32
Bra009238.1-P	Field mustard	extracellular	40.65	41.27
VIT_13s0064g01370.t01	Wine grape	extracellular	40.36	40.96
Solyc09g014590.2.1	Tomato	extracellular	37.39	40.38
KRH12977	Soybean	nucleus	40.06	39.82
TraesCS2D01G207200.1	Wheat	extracellular	39.47	39.82
Bra005916.1-P	Field mustard	extracellular	40.95	39.77
Solyc09g014480.1.1	Tomato	extracellular	39.47	39.7
KRH12976	Soybean	cytosol	43.62	39.52
CDY58889	Canola	extracellular	40.36	39.19
TraesCS7D01G190900.1	Wheat	extracellular	30.86	36.49
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	41.25	36.1
CDX70056	Canola	extracellular	40.65	33.83
TraesCS7D01G243300.1	Wheat	extracellular	31.45	27.89
TraesCS2D01G561100.1	Wheat	extracellular	33.53	25.51
CDX81022	Canola	extracellular, plasma membrane	35.91	23.91

Protein Annotations

EnsemblPlants:TraesCS1D01G010800.1	EnsemblPlantsGene:TraesCS1D01G010800	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138
PFAM:PF00560	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	MapMan:26.8.3.4

Description

No Description!

Coordinates

chr1D:+:5518350..5519363

Molecular Weight (calculated)

35812.6 Da

IEP (calculated)

4.841

GRAVY (calculated)

0.216

Length

337 amino acids

Sequence
(BLAST)

001: MAGASPLLLL CFLLLVSMAV ADQCHDDDHA ALVAIDTAMG SPYHFASWTP DSACCDWYDV DCDADTGRVV GLRVYQDTNM SGAIPDAIGN LTFLETLTLH
101: HLPAISGAIP DSLATLSNLS ELTISYTGVS GPVPSFLGML TALTLLDLSY NSLTGAIPPS LADLLSLSSI NLRRNSLSGA IPSLLLSKSP NGAYLQLSHN
201: NLSGAIPTEF AAVNFSYIDL SRNALSGDAT SLFGAEKAIQ HLDVSRNALN FDLSAVEFPE QLTYTDLSHN AIHGSIPAQV ATLAGLQQFN VSFNRLCGAV
301: PTGGNMSRFD RYSYLHNKCL CGTPLTACRQ RPVGYLH

Best Arabidopsis Sequence Match ( AT5G06870.1 )
(BLAST)

001: MDKTMTLFLL LSTLLLTTSL AKDLCHKDDK TTLLKIKKSL NNPYHLASWD PKTDCCSWYC LECGDATVNH RVTSLIIQDG EISGQIPPEV GDLPYLTSLI
101: FRKLTNLTGH IQPTIAKLKN LTFLRLSWTN LTGPVPEFLS QLKNLEYIDL SFNDLSGSIP SSLSSLRKLE YLELSRNKLT GPIPESFGTF SGKVPSLFLS
201: HNQLSGTIPK SLGNPDFYRI DLSRNKLQGD ASILFGAKKT TWIVDISRNM FQFDLSKVKL AKTLNNLDMN HNGITGSIPA EWSKAYFQLL NVSYNRLCGR
301: IPKGEYIQRF DSYSFFHNKC LCGAPLPSCK

Arabidopsis Description

PGIP2PGIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDM1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.