Factsheet for TraesCS7D01G190900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G189800.1	Wheat	endoplasmic reticulum, extracellular	91.58	92.55
HORVU7Hr1G038570.1	Barley	mitochondrion	91.93	87.33
TraesCS7B01G094700.1	Wheat	plastid	95.09	78.32
EER94664	Sorghum	extracellular	75.79	76.6
Zm00001d029583_P001	Maize	extracellular	74.39	74.65
Os03t0436600-00	Rice	endoplasmic reticulum	73.33	63.53
TraesCS3D01G451400.1	Wheat	extracellular	43.51	36.58
TraesCS3D01G451800.1	Wheat	extracellular	43.51	36.47
TraesCS3D01G451900.1	Wheat	extracellular	41.75	35.1
TraesCS7D01G200000.1	Wheat	cytosol	37.89	34.5
TraesCS3D01G451500.1	Wheat	extracellular	40.0	34.13
TraesCS2D01G470400.1	Wheat	extracellular	40.7	33.92
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	40.0	33.24
TraesCS1D01G010800.1	Wheat	extracellular	36.49	30.86
TraesCS2D01G207200.1	Wheat	extracellular	36.14	30.84
TraesCS7D01G243300.1	Wheat	extracellular	32.63	24.47
TraesCS2D01G561100.1	Wheat	extracellular	30.53	19.64

Protein Annotations

EnsemblPlants:TraesCS7D01G190900.1	EnsemblPlantsGene:TraesCS7D01G190900	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
PANTHER:PTHR44138	PANTHER:PTHR44138:SF1	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:146235015..146235872

Molecular Weight (calculated)

29754.9 Da

IEP (calculated)

8.937

GRAVY (calculated)

0.203

Length

285 amino acids

Sequence
(BLAST)

001: MQLTNPGRRN MPFLVGVAVL VLAAAAARAD GALCDKSDKA ALLAVKAALG NHPDLSGWNS TAPCCAWPGI SCDAATGRVT ELTVFALNIS APVPAAIANL
101: TALQTVNLAY NRLYGRIPDF LGPRALPGLA FLRLDGNRLD GPIPPTAAVY DLSVAGNRLA GPLPAAFAGA EFGSVDVADN QLTGDASALF GAGKRVNSVR
201: LSRNRFAFDL GRVELPGALD ILAVDHNMIY GAIPAAAAAR RWLAFDVSYN NLCGPIPQGR YTHRFGPKHF APNKCLCGRP LAPCS

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.