Factsheet for TraesCS3D01G451500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G098610.1	Barley	extracellular	90.42	89.88
TraesCS3D01G451800.1	Wheat	extracellular	76.95	75.59
TraesCS3D01G451900.1	Wheat	extracellular	76.65	75.52
TraesCS3D01G451400.1	Wheat	extracellular	76.05	74.93
EES17528	Sorghum	extracellular	64.97	64.01
TraesCS1D01G010800.1	Wheat	extracellular	57.48	56.97
TraesCS7D01G200000.1	Wheat	cytosol	50.6	53.99
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	49.7	48.4
TraesCS2D01G470400.1	Wheat	extracellular	49.1	47.95
Bra005918.1-P	Field mustard	extracellular	28.74	46.83
CDX70058	Canola	extracellular	45.81	45.81
Bra009236.1-P	Field mustard	extracellular	45.21	45.21
VIT_13s0064g01370.t01	Wine grape	extracellular	44.61	44.88
AT5G06860.1	Thale cress	extracellular	44.31	44.85
CDX98967	Canola	extracellular	44.91	44.64
CDX70057	Canola	extracellular	44.91	44.64
Bra009237.1-P	Field mustard	extracellular	44.91	44.64
AT5G06870.1	Thale cress	extracellular	44.01	44.55
Bra009234.1-P	Field mustard	extracellular	44.01	44.41
CDX70060	Canola	extracellular	44.01	44.28
CDX98965	Canola	extracellular	44.01	44.28
CDY58887	Canola	extracellular	43.41	43.94
Bra005919.1-P	Field mustard	extracellular	43.41	43.81
CDY58884	Canola	extracellular	43.41	43.81
Bra009238.1-P	Field mustard	extracellular	43.41	43.67
CDX98966	Canola	extracellular	43.41	43.41
KRG95348	Soybean	mitochondrion	45.51	43.3
CDX70059	Canola	extracellular	43.11	43.11
GSMUA_Achr9P12430_001	Banana	extracellular	38.92	43.05
Bra009235.1-P	Field mustard	extracellular	42.81	42.81
PGSC0003DMT400021883	Potato	extracellular	42.52	42.52
CDX81023	Canola	extracellular	43.41	42.4
Bra005917.1-P	Field mustard	extracellular	42.81	41.81
CDY58888	Canola	extracellular	42.52	41.52
Solyc09g014480.1.1	Tomato	extracellular	41.02	40.9
KRH12977	Soybean	nucleus	41.02	40.41
Solyc09g014590.2.1	Tomato	extracellular	37.72	40.38
TraesCS7D01G190900.1	Wheat	extracellular	34.13	40.0
CDY58889	Canola	extracellular	40.42	38.9
Bra005916.1-P	Field mustard	extracellular	40.42	38.9
KRH12976	Soybean	cytosol	42.52	38.17
TraesCS2D01G207200.1	Wheat	extracellular	37.72	37.72
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	43.41	37.66
CDX70056	Canola	extracellular	43.41	35.8
TraesCS7D01G243300.1	Wheat	extracellular	31.14	27.37
TraesCS2D01G561100.1	Wheat	extracellular	32.04	24.15
CDX81022	Canola	extracellular, plasma membrane	35.63	23.52

Protein Annotations

EnsemblPlants:TraesCS3D01G451500.1	EnsemblPlantsGene:TraesCS3D01G451500	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138	PFAM:PF13855
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	MapMan:26.8.3.4	:	:

Description

No Description!

Coordinates

chr3D:+:559165322..559166748

Molecular Weight (calculated)

35922.2 Da

IEP (calculated)

7.109

GRAVY (calculated)

0.148

Length

334 amino acids

Sequence
(BLAST)

001: MRMHSHALFV LLLCSLLVGA ATAEPSRELT YKDCHPDDKA VLLAFPDSWS SSWAPDTLCC DWFAVACDRS TGRVVGFSVF QDPSFTGTIP STIAGLTHLE
101: DLFLHHLPGL SGPIPPAIGK LANLSRLEIS WTGVSGPVPS SLGKLKKLTQ LDLSFNSLSG AIPVSLRTIP GITLSRNRLS GAIPQMFLSE SAGQDVYLDV
201: SHNNLTGAIP AAFAAVNFTH LDLSRNGLTG DASGLFGRGK ELQYIDLSRN AFDFDLSGVV VLPEKLFHLD LSHNAIHGSI PAQVVDVANL LAFNVSYNRL
301: CGPVPTGRNM ARFDLYNFQH NKCLCGAPLP PCKK

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.