Factsheet for TraesCS2D01G470400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G493300.1	Wheat	extracellular	93.86	93.04
TraesCS2A01G470500.1	Wheat	extracellular	92.69	92.69
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	69.3	69.1
TraesCS3D01G451800.1	Wheat	extracellular	53.8	54.12
TraesCS3D01G451900.1	Wheat	extracellular	50.88	51.33
TraesCS3D01G451400.1	Wheat	extracellular	50.58	51.03
TraesCS1D01G010800.1	Wheat	extracellular	48.83	49.55
TraesCS3D01G451500.1	Wheat	extracellular	47.95	49.1
Os05t0104600-01	Rice	extracellular	47.95	48.38
TraesCS7D01G200000.1	Wheat	cytosol	43.57	47.6
Os05t0104700-01	Rice	extracellular	51.46	43.89
GSMUA_Achr9P12430_001	Banana	extracellular	38.3	43.38
Bra005918.1-P	Field mustard	extracellular	25.73	42.93
Solyc09g014590.2.1	Tomato	extracellular	38.01	41.67
Bra009237.1-P	Field mustard	extracellular	40.64	41.37
CDX98966	Canola	extracellular	40.35	41.32
CDX70058	Canola	extracellular	40.06	41.02
CDX70057	Canola	extracellular	40.06	40.77
CDX70059	Canola	extracellular	39.77	40.72
Bra009235.1-P	Field mustard	extracellular	39.77	40.72
Bra009236.1-P	Field mustard	extracellular	39.77	40.72
TraesCS7D01G190900.1	Wheat	extracellular	33.92	40.7
Solyc09g014480.1.1	Tomato	extracellular	39.77	40.6
Bra009234.1-P	Field mustard	extracellular	39.18	40.48
PGSC0003DMT400021883	Potato	extracellular	39.47	40.42
AT5G06870.1	Thale cress	extracellular	38.89	40.3
CDX98967	Canola	extracellular	39.18	39.88
CDX70060	Canola	extracellular	38.6	39.76
AT5G06860.1	Thale cress	extracellular	38.01	39.39
KRG95348	Soybean	mitochondrion	40.35	39.32
CDY58887	Canola	extracellular	37.72	39.09
CDY58884	Canola	extracellular	37.72	38.97
CDX81023	Canola	extracellular	38.89	38.89
Bra009238.1-P	Field mustard	extracellular	37.72	38.86
CDX98965	Canola	extracellular	37.72	38.86
Bra005919.1-P	Field mustard	extracellular	37.43	38.67
KRH12977	Soybean	nucleus	38.01	38.35
CDY58888	Canola	extracellular	38.3	38.3
Bra005917.1-P	Field mustard	extracellular	38.3	38.3
VIT_13s0064g01370.t01	Wine grape	extracellular	37.13	38.25
Bra005916.1-P	Field mustard	extracellular	38.01	37.46
TraesCS2D01G207200.1	Wheat	extracellular	35.96	36.83
CDY58889	Canola	extracellular	37.13	36.6
KRH12976	Soybean	cytosol	38.3	35.22
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	37.13	32.99
CDX70056	Canola	extracellular	37.72	31.85
TraesCS7D01G243300.1	Wheat	extracellular	30.99	27.89
TraesCS2D01G561100.1	Wheat	extracellular	29.82	23.02
CDX81022	Canola	extracellular, plasma membrane	31.87	21.54

Protein Annotations

EnsemblPlants:TraesCS2D01G470400.1	EnsemblPlantsGene:TraesCS2D01G470400	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138
PFAM:PF08263	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	TMHMM:TMhelix
MapMan:26.8.3.4	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:574819041..574820069

Molecular Weight (calculated)

36450.1 Da

IEP (calculated)

8.721

GRAVY (calculated)

0.273

Length

342 amino acids

Sequence
(BLAST)

001: MRAPSLGRCA TVALVLLLAT IAAAAAAART KNECHAGDKA ALLAIKAGFG NASYFQSWTP DYPCCEWISV FCDLSASPYT LRRVVAVSFL RDASLVGPLP
101: GASVARLTAL QQLILIHVPG VNGTIPRDLA RLSNLNFVDV SYTGISGPVP SFLSRLTKLT YLRLSFNSLT GPIPASLADV PNLSFLDLAG NRLTGTIPPL
201: LLSRTNDTAY LSLSHNNLTG GVPADFAAVR FSSLDLSHNA LAGEALLLFG LNKSLESLDL SRNAFSFNLS AVTLPSQLGM LDISHDDVYG ALPPLVAKLQ
301: YLNVSYNRLS GRVPIGGNMD RFDRYCFQHN KGLCGTPLPP CK

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.