Factsheet for Bra005919.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58884	Canola	extracellular	98.79	98.79
Bra005918.1-P	Field mustard	extracellular	55.89	90.24
Bra005917.1-P	Field mustard	extracellular	88.22	85.38
Bra005916.1-P	Field mustard	extracellular	81.27	77.52
Bra009238.1-P	Field mustard	extracellular	76.13	75.9
AT5G06870.1	Thale cress	extracellular	71.0	71.21
Bra009234.1-P	Field mustard	extracellular	68.58	68.58
Bra009235.1-P	Field mustard	extracellular	68.88	68.26
Bra009237.1-P	Field mustard	extracellular	68.28	67.26
Bra009236.1-P	Field mustard	extracellular	67.67	67.07
VIT_08s0007g07690.t01	Wine grape	extracellular	58.01	55.81
Solyc07g065090.1.1	Tomato	extracellular	54.08	54.74
KRH12977	Soybean	nucleus	55.59	54.28
PGSC0003DMT400057136	Potato	extracellular	53.47	53.96
KRG95348	Soybean	mitochondrion	57.1	53.85
Bra038700.1-P	Field mustard	extracellular, vacuole	50.76	51.69
TraesCS3A01G459300.1	Wheat	cytosol	22.66	50.68
KRH12976	Soybean	cytosol	55.59	49.46
Bra034774.1-P	Field mustard	extracellular	48.64	49.39
Bra034773.1-P	Field mustard	cytosol	46.22	48.57
GSMUA_Achr9P12430_001	Banana	extracellular	44.11	48.34
TraesCS3A01G459200.1	Wheat	extracellular	45.92	44.71
TraesCS3D01G451800.1	Wheat	extracellular	45.92	44.71
Zm00001d035753_P001	Maize	extracellular	45.62	44.28
TraesCS3D01G451900.1	Wheat	extracellular	45.02	43.95
TraesCS3B01G498900.1	Wheat	extracellular	45.02	43.82
HORVU3Hr1G098610.1	Barley	extracellular	44.41	43.75
TraesCS3D01G451500.1	Wheat	extracellular	43.81	43.41
TraesCS3D01G451400.1	Wheat	extracellular	44.11	43.07
EES17528	Sorghum	extracellular	43.81	42.77
TraesCS1A01G012600.1	Wheat	extracellular	43.2	42.56
TraesCS1D01G010800.1	Wheat	extracellular	43.2	42.43
Os05t0104200-01	Rice	extracellular	39.58	42.39
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	45.62	42.3
EES17529	Sorghum	extracellular	43.5	42.23
TraesCS3A01G459000.1	Wheat	extracellular	43.5	42.23
Os05t0104150-01	Rice	extracellular	43.2	41.81
TraesCS1B01G017300.1	Wheat	extracellular	41.99	41.25
Os05t0104600-01	Rice	extracellular	41.99	41.0
TraesCS7D01G200000.1	Wheat	cytosol	38.37	40.58
Zm00001d035756_P001	Maize	vacuole	41.99	39.71
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	39.27	37.9
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	41.69	37.5
TraesCS2D01G470400.1	Wheat	extracellular	38.67	37.43
HORVU2Hr1G106620.1	Barley	extracellular	38.37	37.35
TraesCS2A01G470500.1	Wheat	extracellular	38.37	37.13
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	38.37	37.13
TraesCS7B01G103900.1	Wheat	extracellular	37.76	37.09
TraesCS2A01G470600.1	Wheat	extracellular	37.76	36.98
TraesCS2B01G493300.1	Wheat	extracellular	38.07	36.52
Os05t0104700-01	Rice	extracellular	42.3	34.91
EES17527	Sorghum	extracellular, plastid	41.39	34.86
Bra035741.1-P	Field mustard	extracellular	32.33	29.32
TraesCS7A01G197500.1	Wheat	extracellular	15.71	28.42
Bra023383.1-P	Field mustard	extracellular	29.61	28.24
Bra001460.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	31.72	28.23
Bra038737.1-P	Field mustard	endoplasmic reticulum, extracellular	31.42	27.88
Bra008869.1-P	Field mustard	extracellular, plasma membrane	31.12	27.54
Bra008870.1-P	Field mustard	extracellular	30.21	26.81
Bra023925.1-P	Field mustard	extracellular	29.91	26.33
Bra028006.1-P	Field mustard	endoplasmic reticulum, vacuole	30.82	21.29
Bra010209.1-P	Field mustard	extracellular	30.21	20.92
Bra009680.1-P	Field mustard	extracellular, vacuole	34.44	19.42
Bra026499.1-P	Field mustard	plastid	27.19	18.18
Bra016239.1-P	Field mustard	cytosol	13.29	17.05

Protein Annotations

MapMan:26.8.3.4	Gene3D:3.80.10.10	ProteinID:ACP28176	ProteinID:ACP28176.1	EnsemblPlantsGene:Bra005919	EnsemblPlants:Bra005919.1
EnsemblPlants:Bra005919.1-P	EMBL:FJ898286	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M4CNY1	PFAM:PF08263
PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR44138	SUPFAM:SSF52058	SignalP:SignalP-noTM
UniParc:UPI000253F65B	SEG:seg	:	:	:	:

Description

AT5G06870 (E=3e-121) PGIP2, ATPGIP2 | PGIP2 (POLYGALACTURONASE INHIBITING PROTEIN 2); protein binding

Coordinates

chrA03:+:1220349..1221431

Molecular Weight (calculated)

37195.9 Da

IEP (calculated)

8.194

GRAVY (calculated)

-0.176

Length

331 amino acids

Sequence
(BLAST)

001: MEGKTTTLLL LLFTLLLTTS LSKDLCHKDD KNTLLKIKKA MNDPYTIISW DPKDDCCTWY AVECGNASIN HRVTSLDISN DDVSAQIPPE VGDLPYLEYL
101: IFHKLPNLTG EIPPTITKLK YLRYLWLSWN NLSGPVPELL SQLKNLEYIN LSFNKLSGSI PGSLSLLPKL EFLELSRNKL TGSIPESFGS FKGVVYALYL
201: SHNQLSGSIP KSLGNLDINQ IDLSRNKLEG DASMLFGAKK TTQHIDLSRN MFQFNISKVK VAKTVNFLDL NHNSLTGSIP VQWTQLDLQT FNVSYKRLCG
301: RIPQGGDLQR FDAYAYLHNK CLCDAPLQSC K

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.