Factsheet for GSMUA_Achr9P12430_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0104200-01	Rice	extracellular	47.35	46.28
AT5G06870.1	Thale cress	extracellular	50.0	45.76
CDY58884	Canola	extracellular	49.01	44.71
Bra005919.1-P	Field mustard	extracellular	48.34	44.11
Solyc09g014590.2.1	Tomato	extracellular	45.36	43.91
CDX98966	Canola	extracellular	48.34	43.71
CDY58887	Canola	extracellular	47.68	43.64
CDX70058	Canola	extracellular	48.01	43.41
Zm00001d035753_P001	Maize	extracellular	49.01	43.4
Bra009238.1-P	Field mustard	extracellular	47.68	43.37
Bra009235.1-P	Field mustard	extracellular	47.68	43.11
CDX70059	Canola	extracellular	47.68	43.11
CDY58888	Canola	extracellular	48.68	42.98
Bra005917.1-P	Field mustard	extracellular	48.68	42.98
CDX70057	Canola	extracellular	47.68	42.86
Bra009237.1-P	Field mustard	extracellular	47.68	42.86
CDX81023	Canola	extracellular	48.34	42.69
CDX98967	Canola	extracellular	47.02	42.26
Bra009236.1-P	Field mustard	extracellular	46.69	42.22
TraesCS3A01G459200.1	Wheat	extracellular	46.69	41.47
TraesCS3B01G498900.1	Wheat	extracellular	46.69	41.47
TraesCS3D01G451800.1	Wheat	extracellular	46.69	41.47
KRG95348	Soybean	mitochondrion	48.01	41.31
TraesCS3D01G451400.1	Wheat	extracellular	46.36	41.3
Solyc09g014480.1.1	Tomato	extracellular	45.7	41.19
EES17529	Sorghum	extracellular	46.36	41.06
EES17528	Sorghum	extracellular	46.03	41.0
Bra005918.1-P	Field mustard	extracellular	27.81	40.98
AT5G06860.1	Thale cress	extracellular	44.7	40.91
PGSC0003DMT400021883	Potato	extracellular	45.03	40.72
TraesCS3D01G451900.1	Wheat	extracellular	45.7	40.71
KRH12977	Soybean	nucleus	45.7	40.71
CDX98965	Canola	extracellular	44.7	40.66
Bra009234.1-P	Field mustard	extracellular	44.37	40.48
TraesCS3A01G459000.1	Wheat	extracellular	45.7	40.47
CDX70060	Canola	extracellular	44.37	40.36
Bra005916.1-P	Field mustard	extracellular	46.03	40.06
CDY58889	Canola	extracellular	45.7	39.77
TraesCS1D01G010800.1	Wheat	extracellular	44.04	39.47
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	46.36	39.22
Os05t0104150-01	Rice	extracellular	44.37	39.18
TraesCS1A01G012600.1	Wheat	extracellular	43.38	38.99
TraesCS3D01G451500.1	Wheat	extracellular	43.05	38.92
TraesCS7D01G200000.1	Wheat	cytosol	40.07	38.66
TraesCS2D01G470400.1	Wheat	extracellular	43.38	38.3
TraesCS1B01G017300.1	Wheat	extracellular	42.72	38.28
HORVU3Hr1G098610.1	Barley	extracellular	42.38	38.1
Zm00001d035756_P001	Maize	vacuole	44.04	38.0
VIT_13s0064g01370.t01	Wine grape	extracellular	41.72	37.95
Os05t0104600-01	Rice	extracellular	42.38	37.76
TraesCS7B01G103900.1	Wheat	extracellular	41.72	37.39
TraesCS2B01G493300.1	Wheat	extracellular	42.38	37.1
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	47.02	36.88
TraesCS2A01G470500.1	Wheat	extracellular	41.06	36.26
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	41.06	36.15
GSMUA_Achr6P22250_001	Banana	extracellular	39.07	35.98
HORVU2Hr1G106620.1	Barley	extracellular	40.4	35.88
TraesCS3A01G459300.1	Wheat	cytosol	17.55	35.81
KRH12976	Soybean	cytosol	44.04	35.75
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	43.38	35.6
CDX70056	Canola	extracellular	47.68	35.56
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	40.07	35.38
TraesCS2A01G470600.1	Wheat	extracellular	39.4	35.21
EES17527	Sorghum	extracellular, plastid	44.7	34.35
Os05t0104700-01	Rice	extracellular	41.06	30.92
TraesCS7A01G197500.1	Wheat	extracellular	18.54	30.6
GSMUA_Achr4P01520_001	Banana	cytosol	27.15	29.82
GSMUA_Achr10P...	Banana	cytosol	26.16	28.73
GSMUA_Achr3P03820_001	Banana	endoplasmic reticulum, extracellular	33.44	27.15
GSMUA_Achr1P06920_001	Banana	plastid	18.54	24.89
CDX81022	Canola	extracellular, plasma membrane	39.74	23.72
GSMUA_AchrUn_...	Banana	cytosol	19.21	17.47

Protein Annotations

EnsemblPlants:GSMUA_Achr9P12430_001	EnsemblPlants:GSMUA_Achr9T12430_001	EnsemblPlantsGene:GSMUA_Achr9G12430_001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PANTHER:PTHR44138	PFAM:PF00560	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
UniParc:UPI0002961192	UniProt:M0TZQ2	MapMan:26.8.3.4	:	:	:

Description

Putative Polygalacturonase inhibitor [Source:GMGC_GENE;Acc:GSMUA_Achr9G12430_001]

Coordinates

chr9:+:8111711..8112819

Molecular Weight (calculated)

33088.9 Da

IEP (calculated)

6.758

GRAVY (calculated)

0.085

Length

302 amino acids

Sequence
(BLAST)

001: MASVLDFLCL LFLVLLLSSS PVSSGKCNKD DKKALLAIKK ALGDPYVLIA WTSQYACCDW AGVRCNETTS RVTSLDIDGT NTSFAIPSAV AHLPFLTSLT
101: FHKNPGLTGP IPPAIGTITD LTFLRLDWNS LSGPVPDFLA RLTRLDYLNL AFNQFSGAIP ASLATLPLSY LAIDHNRLTG PIPESLARSP AAYLYLSNNN
201: LTGSIPPSFA SNTFERIDLN HAIEFNITQV EIPEEMTALD LNHNRVYGRL PPEMGKVEWQ LLNVSYNRLC GPIPSGEGIQ RFDRYAFFHN KCLCGPPLPA
301: CK

Best Arabidopsis Sequence Match ( AT5G06870.1 )
(BLAST)

001: MDKTMTLFLL LSTLLLTTSL AKDLCHKDDK TTLLKIKKSL NNPYHLASWD PKTDCCSWYC LECGDATVNH RVTSLIIQDG EISGQIPPEV GDLPYLTSLI
101: FRKLTNLTGH IQPTIAKLKN LTFLRLSWTN LTGPVPEFLS QLKNLEYIDL SFNDLSGSIP SSLSSLRKLE YLELSRNKLT GPIPESFGTF SGKVPSLFLS
201: HNQLSGTIPK SLGNPDFYRI DLSRNKLQGD ASILFGAKKT TWIVDISRNM FQFDLSKVKL AKTLNNLDMN HNGITGSIPA EWSKAYFQLL NVSYNRLCGR
301: IPKGEYIQRF DSYSFFHNKC LCGAPLPSCK

Arabidopsis Description

PGIP2PGIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDM1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.