CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58884	Canola	extracellular	94.24	93.96
Bra005918.1-P	Field mustard	extracellular	57.58	92.68
CDX81023	Canola	extracellular	87.27	84.21
CDY58888	Canola	extracellular	86.06	83.04
CDY58889	Canola	extracellular	81.82	77.81
AT5G06870.1	Thale cress	extracellular	71.21	71.21
CDX70060	Canola	extracellular	69.7	69.28
CDX98965	Canola	extracellular	69.7	69.28
CDX70058	Canola	extracellular	68.79	67.96
CDX70059	Canola	extracellular	68.18	67.37
CDX98966	Canola	extracellular	67.88	67.07
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	77.88	66.75
CDX70057	Canola	extracellular	67.88	66.67
CDX98967	Canola	extracellular	66.97	65.77
CDX70056	Canola	extracellular	77.58	63.21
VIT_08s0007g07690.t01	Wine grape	extracellular	58.79	56.4
Solyc07g065090.1.1	Tomato	extracellular	54.55	55.05
KRH12977	Soybean	nucleus	56.36	54.87
PGSC0003DMT400057136	Potato	extracellular	53.94	54.27
KRG95348	Soybean	mitochondrion	57.58	54.13
CDY52623	Canola	extracellular, vacuole	51.21	52.0
CDY50569	Canola	extracellular, vacuole	50.61	51.38
CDY05006	Canola	extracellular	50.3	51.23
TraesCS3A01G459300.1	Wheat	cytosol	22.73	50.68
CDY42127	Canola	extracellular	49.09	49.69
KRH12976	Soybean	cytosol	55.76	49.46
CDY08451	Canola	endoplasmic reticulum, extracellular	48.48	49.08
CDY14065	Canola	extracellular	48.18	49.07
CDY42130	Canola	extracellular	48.18	48.62
CDY08448	Canola	extracellular	47.88	48.32
CDY42131	Canola	extracellular	46.97	47.99
GSMUA_Achr9P12430_001	Banana	extracellular	43.64	47.68
CDX81022	Canola	extracellular, plasma membrane	72.73	47.43
CDY08450	Canola	extracellular	45.76	46.75
CDY42129	Canola	cytosol	45.45	46.3
Zm00001d035753_P001	Maize	extracellular	46.36	44.87
TraesCS3A01G459200.1	Wheat	extracellular	46.06	44.71
TraesCS3D01G451800.1	Wheat	extracellular	46.06	44.71
TraesCS3D01G451900.1	Wheat	extracellular	45.45	44.25
TraesCS3B01G498900.1	Wheat	extracellular	45.15	43.82
Os05t0104200-01	Rice	extracellular	40.91	43.69
HORVU3Hr1G098610.1	Barley	extracellular	44.24	43.45
TraesCS3D01G451500.1	Wheat	extracellular	43.94	43.41
EES17529	Sorghum	extracellular	44.55	43.11
EES17528	Sorghum	extracellular	44.24	43.07
TraesCS3D01G451400.1	Wheat	extracellular	44.24	43.07
TraesCS1A01G012600.1	Wheat	extracellular	43.64	42.86
TraesCS1D01G010800.1	Wheat	extracellular	43.64	42.73
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	45.76	42.3
TraesCS3A01G459000.1	Wheat	extracellular	43.33	41.94
Os05t0104600-01	Rice	extracellular	43.03	41.89
Os05t0104150-01	Rice	extracellular	43.33	41.81
TraesCS1B01G017300.1	Wheat	extracellular	42.42	41.54
TraesCS7D01G200000.1	Wheat	cytosol	38.79	40.89
Zm00001d035756_P001	Maize	vacuole	43.03	40.57
TraesCS7B01G103900.1	Wheat	extracellular	39.09	38.28
TraesCS2D01G470400.1	Wheat	extracellular	39.09	37.72
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	41.82	37.5
TraesCS2A01G470500.1	Wheat	extracellular	38.79	37.43
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	38.79	37.32
HORVU2Hr1G106620.1	Barley	extracellular	37.58	36.47
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	37.58	36.26
TraesCS2B01G493300.1	Wheat	extracellular	37.88	36.23
TraesCS2A01G470600.1	Wheat	extracellular	36.97	36.09
Os05t0104700-01	Rice	extracellular	43.33	35.66
EES17527	Sorghum	extracellular, plastid	42.42	35.62
CDY19601	Canola	extracellular	32.12	29.04
CDY06385	Canola	extracellular	31.52	28.49
CDX85681	Canola	extracellular	29.7	28.41
CDY60388	Canola	extracellular	31.21	28.22
CDY52664	Canola	extracellular	31.82	28.15
CDX91155	Canola	extracellular	29.39	28.03
CDY27559	Canola	extracellular	30.91	27.95
TraesCS7A01G197500.1	Wheat	extracellular	15.45	27.87
CDY50534	Canola	extracellular, vacuole	31.21	27.61
CDX73812	Canola	endoplasmic reticulum, extracellular, vacuole	30.91	27.42
CDY00787	Canola	endoplasmic reticulum, extracellular, vacuole	30.91	27.42
CDY53975	Canola	extracellular	30.0	26.54
CDY68308	Canola	extracellular	30.0	26.47
CDY69775	Canola	extracellular, plasma membrane	29.7	25.99
CDY69275	Canola	extracellular	28.79	25.4
CDY40923	Canola	extracellular, vacuole	29.39	20.68
CDY38783	Canola	extracellular	25.45	20.49
CDY15279	Canola	plastid	26.36	20.42
CDX80361	Canola	extracellular, vacuole	35.76	20.1
CDX88024	Canola	extracellular, vacuole	35.45	19.93
CDY64876	Canola	extracellular, vacuole	34.85	19.73
CDX93759	Canola	endoplasmic reticulum, extracellular, vacuole	9.7	19.63
CDY11623	Canola	extracellular	24.55	19.38
CDY16850	Canola	plastid	27.58	18.38
CDX93758	Canola	plastid	13.94	17.9

Protein Annotations

MapMan:26.8.3.4	Gene3D:3.80.10.10	UniProt:A0A078J4L1	EnsemblPlants:CDY58887	ProteinID:CDY58887	ProteinID:CDY58887.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00025293001	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019
PFscan:PS51450	PANTHER:PTHR44138	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI0004EE7D0A	SEG:seg

Description

BnaA03g55630DBnaA03g55630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4L1]

Coordinates

chrLK033708:-:43643..44730

Molecular Weight (calculated)

37098.8 Da

IEP (calculated)

7.470

GRAVY (calculated)

-0.138

Length

330 amino acids

Sequence
(BLAST)

001: MDKTTTLLLL LFALVLTTSL SKDLCHKDDK NTLLKIKKAM NDPYTIISWD PKEDCCTWVA VECGNATINH RVTFLDISND DVSAQIPPEV GDLPYLEYLI
101: FHKLPNLTGE IPPTIAKLKY LRNLWLHWNN LTGPVPEFLS QLKNLQYIDL SFNDLSGSIP GSLSLLPKLE ILDLSRNKLT GSIPESFGSF KGVMYALFLS
201: HNQLSGSIPK SLGNLDINQI DLSRNKLEGD ASMFFGAKKT TQHIDLSRNM FQFNISKVKV AKTVNFLDLN HNSLTGSIPV QWTQLDLQTF NVSYNRLCGR
301: IPQGGDLQRF DAYAYLHNKC LCDAPLQSCK

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.