CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60388	Canola	extracellular	97.81	97.81
CDY19601	Canola	extracellular	92.33	92.33
AT3G20820.1	Thale cress	extracellular	92.33	92.33
CDY06385	Canola	extracellular	91.78	91.78
Bra023925.1-P	Field mustard	extracellular	93.97	91.22
KRH23157	Soybean	nucleus	72.6	72.01
VIT_06s0004g01750.t01	Wine grape	extracellular	70.14	70.33
Solyc11g056680.1.1	Tomato	extracellular	68.77	68.96
PGSC0003DMT400003166	Potato	extracellular, vacuole	68.22	68.41
CDX91155	Canola	extracellular	61.92	65.32
CDX85681	Canola	extracellular	60.0	63.48
GSMUA_Achr10P...	Banana	cytosol	46.85	62.18
CDY68308	Canola	extracellular	63.56	62.03
CDY69775	Canola	extracellular, plasma membrane	63.84	61.8
GSMUA_Achr4P01520_001	Banana	cytosol	46.3	61.45
CDY69275	Canola	extracellular	62.47	60.96
CDY53975	Canola	extracellular	62.19	60.86
KRH24680	Soybean	extracellular	59.45	59.45
GSMUA_Achr3P03820_001	Banana	endoplasmic reticulum, extracellular	59.18	58.06
CDY00787	Canola	endoplasmic reticulum, extracellular, vacuole	58.9	57.8
CDX73812	Canola	endoplasmic reticulum, extracellular, vacuole	58.36	57.26
CDY50534	Canola	extracellular, vacuole	58.08	56.84
CDY52664	Canola	extracellular	58.08	56.84
KRH29680	Soybean	endoplasmic reticulum	59.45	56.07
KRH24681	Soybean	extracellular	52.88	54.37
Os08t0505900-01	Rice	extracellular	55.89	53.68
TraesCS7B01G146800.1	Wheat	extracellular	52.6	50.53
TraesCS7A01G244600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.33	50.26
TraesCS7D01G243300.1	Wheat	extracellular	52.33	50.26
HORVU7Hr1G050110.1	Barley	vacuole	52.88	49.74
Zm00001d031434_P001	Maize	extracellular	51.78	49.61
HORVU7Hr1G050140.1	Barley	plastid	52.88	49.49
EES14271	Sorghum	cytosol	53.15	48.38
CDY08451	Canola	endoplasmic reticulum, extracellular	29.59	33.13
CDY42127	Canola	extracellular	28.77	32.21
CDY52623	Canola	extracellular, vacuole	28.22	31.69
CDX70057	Canola	extracellular	29.04	31.55
CDY14065	Canola	extracellular	27.95	31.48
CDY58884	Canola	extracellular	28.49	31.42
CDX98967	Canola	extracellular	28.77	31.25
CDY05006	Canola	extracellular	27.67	31.17
CDY50569	Canola	extracellular, vacuole	27.67	31.08
CDY58887	Canola	extracellular	27.95	30.91
CDY42130	Canola	extracellular	27.67	30.89
CDX98965	Canola	extracellular	27.95	30.72
CDY08448	Canola	extracellular	27.4	30.58
CDX70059	Canola	extracellular	27.95	30.54
CDX70058	Canola	extracellular	27.95	30.54
CDX70060	Canola	extracellular	27.67	30.42
CDY58888	Canola	extracellular	28.49	30.41
CDX98966	Canola	extracellular	27.67	30.24
CDY08450	Canola	extracellular	26.58	30.03
CDY42131	Canola	extracellular	26.3	29.72
CDY42129	Canola	cytosol	26.3	29.63
CDX81023	Canola	extracellular	27.12	28.95
CDY58889	Canola	extracellular	26.85	28.24
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	27.4	25.97
CDX93759	Canola	endoplasmic reticulum, extracellular, vacuole	11.23	25.15
CDX70056	Canola	extracellular	27.12	24.44
CDY64876	Canola	extracellular, vacuole	37.26	23.33
CDY40923	Canola	extracellular, vacuole	29.59	23.03
CDX88024	Canola	extracellular, vacuole	36.44	22.66
CDX80361	Canola	extracellular, vacuole	36.44	22.66
CDY15279	Canola	plastid	26.3	22.54
CDY38783	Canola	extracellular	24.93	22.2
CDY11623	Canola	extracellular	24.66	21.53
CDY16850	Canola	plastid	28.49	21.01
CDX93758	Canola	plastid	13.97	19.84
CDX81022	Canola	extracellular, plasma membrane	23.56	17.0

Protein Annotations

EnsemblPlants:CDY27559	EnsemblPlantsGene:GSBRNA2T00038280001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44401
PANTHER:PTHR44401:SF2	PFAM:PF08263	PFAM:PF13855	ProteinID:CDY27559	ProteinID:CDY27559.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52058	UniParc:UPI0004EEFE27	UniProt:A0A078GQV0	MapMan:35.1	:

Description

BnaC01g32420DBnaC01g32420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQV0]

Coordinates

chrLK032206:-:440169..441446

Molecular Weight (calculated)

39740.4 Da

IEP (calculated)

8.356

GRAVY (calculated)

0.095

Length

365 amino acids

Sequence
(BLAST)

001: MKLNVVVSLI LLLISTATCC PPSDLRALLA FRSALHEPYL GIFNSWTGQD CCHNWYGVSC DAVTHRVADI NLRGESEDPI FERAHRTGYM TGRISPAICD
101: LARLSAITIA DWKGISGDIP KCITRLSFLR TIDLIGNQIS GEIPNDIGRL NRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRTNLITGL IPTDFGRLTM
201: LSRALLSGNR ITGRIPESLT KIYRLADVDL SGNQLYGTIP PSLGRMPVLA TLNLDGNKIS GEIPQTLMTS SVMNLNLSRN LLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PSSISGASFI GHLDLSHNHL CGRIPVGSPF DHLEAASFMF NDCLCGKPLK ACLKN

Best Arabidopsis Sequence Match ( AT3G20820.1 )
(BLAST)

001: MNLNVVVLLL LLLISSATCC PPSDRRALLA FRSALHEPYL GIFNSWTGQD CCHNWYGISC DSLTHRVADI NLRGESEDPI FERAHRTGYM TGHISASICE
101: LTRLSAITIA DWKGISGEIP KCITRLPFLR TLDLIGNQIS GGIPYDIGRL NRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRNNLISGV IPSDVGRLKM
201: LSRALLSGNR ITGRIPESLT NIYRLADVDL SGNQLYGTIP PSLGRMSVLA TLNLDGNKIS GEIPQTLMTS SVMNLNLSRN LLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PRSISGASFI GHLDLSHNHL CGRIPVGSPF DHLEAASFMF NDCLCGKPLR ACLKN

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LT39]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.