CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035741.1-P	Field mustard	extracellular	100.0	100.0
CDY06385	Canola	extracellular	98.9	98.9
AT3G20820.1	Thale cress	extracellular	93.15	93.15
CDY27559	Canola	extracellular	92.33	92.33
CDY60388	Canola	extracellular	92.05	92.05
KRH23157	Soybean	nucleus	75.07	74.46
VIT_06s0004g01750.t01	Wine grape	extracellular	72.33	72.53
Solyc11g056680.1.1	Tomato	extracellular	67.95	68.13
PGSC0003DMT400003166	Potato	extracellular, vacuole	67.67	67.86
CDX85681	Canola	extracellular	60.82	64.35
CDX91155	Canola	extracellular	60.82	64.16
GSMUA_Achr10P...	Banana	cytosol	47.12	62.55
CDY69775	Canola	extracellular, plasma membrane	64.38	62.33
CDY68308	Canola	extracellular	63.84	62.3
CDY53975	Canola	extracellular	63.56	62.2
GSMUA_Achr4P01520_001	Banana	cytosol	46.85	62.18
CDY69275	Canola	extracellular	63.56	62.03
KRH24680	Soybean	extracellular	59.73	59.73
GSMUA_Achr3P03820_001	Banana	endoplasmic reticulum, extracellular	59.18	58.06
CDY00787	Canola	endoplasmic reticulum, extracellular, vacuole	58.36	57.26
CDX73812	Canola	endoplasmic reticulum, extracellular, vacuole	57.81	56.72
CDY52664	Canola	extracellular	57.81	56.57
CDY50534	Canola	extracellular, vacuole	57.81	56.57
KRH29680	Soybean	endoplasmic reticulum	59.45	56.07
KRH24681	Soybean	extracellular	54.25	55.77
Os08t0505900-01	Rice	extracellular	56.71	54.47
TraesCS7B01G146800.1	Wheat	extracellular	53.42	51.32
TraesCS7A01G244600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	53.15	51.05
TraesCS7D01G243300.1	Wheat	extracellular	53.15	51.05
Zm00001d031434_P001	Maize	extracellular	53.15	50.92
HORVU7Hr1G050110.1	Barley	vacuole	53.7	50.52
HORVU7Hr1G050140.1	Barley	plastid	53.7	50.26
EES14271	Sorghum	cytosol	54.52	49.63
CDY08451	Canola	endoplasmic reticulum, extracellular	30.14	33.74
CDY42127	Canola	extracellular	29.32	32.82
CDY58884	Canola	extracellular	29.59	32.63
CDY52623	Canola	extracellular, vacuole	28.77	32.31
CDX70057	Canola	extracellular	29.59	32.14
CDY58887	Canola	extracellular	29.04	32.12
CDX98967	Canola	extracellular	29.32	31.85
CDY14065	Canola	extracellular	28.22	31.79
CDY50569	Canola	extracellular, vacuole	28.22	31.69
CDY58888	Canola	extracellular	29.59	31.58
CDY05006	Canola	extracellular	27.95	31.48
CDX70059	Canola	extracellular	28.77	31.44
CDX70058	Canola	extracellular	28.77	31.44
CDX98966	Canola	extracellular	28.49	31.14
CDX98965	Canola	extracellular	28.22	31.02
CDY42130	Canola	extracellular	27.67	30.89
CDX70060	Canola	extracellular	27.95	30.72
CDY08448	Canola	extracellular	27.4	30.58
CDX81023	Canola	extracellular	28.22	30.12
CDY08450	Canola	extracellular	26.58	30.03
CDY42131	Canola	extracellular	26.58	30.03
CDY42129	Canola	cytosol	26.03	29.32
CDY58889	Canola	extracellular	27.67	29.11
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	27.95	26.49
CDX70056	Canola	extracellular	27.67	24.94
CDY64876	Canola	extracellular, vacuole	38.63	24.19
CDX93759	Canola	endoplasmic reticulum, extracellular, vacuole	10.68	23.93
CDX88024	Canola	extracellular, vacuole	37.81	23.51
CDX80361	Canola	extracellular, vacuole	37.81	23.51
CDY40923	Canola	extracellular, vacuole	29.59	23.03
CDY15279	Canola	plastid	26.85	23.0
CDY38783	Canola	extracellular	24.93	22.2
CDY16850	Canola	plastid	29.86	22.02
CDY11623	Canola	extracellular	24.66	21.53
CDX93758	Canola	plastid	14.25	20.23
CDX81022	Canola	extracellular, plasma membrane	24.11	17.39

Protein Annotations

EnsemblPlants:CDY19601	EnsemblPlantsGene:GSBRNA2T00009266001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44401
PANTHER:PTHR44401:SF2	PFAM:PF08263	PFAM:PF13855	ProteinID:CDY19601	ProteinID:CDY19601.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52058	UniParc:UPI00025479FB	UniProt:A0A078G2S0	MapMan:35.1	:

Description

BnaA05g20090DBnaA05g20090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2S0]

Coordinates

chrLK032098:-:446239..447526

Molecular Weight (calculated)

39850.5 Da

IEP (calculated)

8.621

GRAVY (calculated)

0.062

Length

365 amino acids

Sequence
(BLAST)

001: MKLNVFVSLL LLLVSTATCC PPSDRRALLA FRAALHEPYL GIFNSWTGQD CCHNWYGVSC DSLTHRVADI NLRGESEDPI FERAHRTGYM TGHISPAICD
101: LARLSAITIA DWKGISGEIP TCITRLPFLR TLDLIGNQIS GGIPNDIGRL HRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRNNLISGV IPPDFGRLTM
201: LSRALLSGNR ITGRIPESLT RIYRLADVDL SGNQLYGPIP ASLGRMAVLA TLNLDGNKFS GEIPQTLMTS SVMNLNLSRN MLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PRSISGASFI GHLDLSHNHL CGRIPVGSPF SHLEAASFMY NDCLCGKPLR ACLKN

Best Arabidopsis Sequence Match ( AT3G20820.1 )
(BLAST)

001: MNLNVVVLLL LLLISSATCC PPSDRRALLA FRSALHEPYL GIFNSWTGQD CCHNWYGISC DSLTHRVADI NLRGESEDPI FERAHRTGYM TGHISASICE
101: LTRLSAITIA DWKGISGEIP KCITRLPFLR TLDLIGNQIS GGIPYDIGRL NRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRNNLISGV IPSDVGRLKM
201: LSRALLSGNR ITGRIPESLT NIYRLADVDL SGNQLYGTIP PSLGRMSVLA TLNLDGNKIS GEIPQTLMTS SVMNLNLSRN LLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PRSISGASFI GHLDLSHNHL CGRIPVGSPF DHLEAASFMF NDCLCGKPLR ACLKN

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LT39]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.