Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008870.1-P | Field mustard | extracellular | 97.32 | 97.32 |
| CDY69275 | Canola | extracellular | 95.17 | 94.92 |
| CDY68308 | Canola | extracellular | 87.94 | 87.7 |
| CDY69775 | Canola | extracellular, plasma membrane | 87.4 | 86.47 |
| CDX91155 | Canola | extracellular | 73.46 | 79.19 |
| AT5G12940.1 | Thale cress | extracellular | 76.94 | 77.36 |
| CDX85681 | Canola | extracellular | 71.31 | 77.1 |
| CDY19601 | Canola | extracellular | 62.2 | 63.56 |
| CDY06385 | Canola | extracellular | 61.66 | 63.01 |
| CDY60388 | Canola | extracellular | 61.39 | 62.74 |
| CDY27559 | Canola | extracellular | 60.86 | 62.19 |
| KRH23157 | Soybean | nucleus | 59.79 | 60.6 |
| VIT_06s0004g01750.t01 | Wine grape | extracellular | 58.98 | 60.44 |
| PGSC0003DMT400003166 | Potato | extracellular, vacuole | 56.84 | 58.24 |
| Solyc11g056680.1.1 | Tomato | extracellular | 56.84 | 58.24 |
| GSMUA_Achr10P... | Banana | cytosol | 40.48 | 54.91 |
| GSMUA_Achr4P01520_001 | Banana | cytosol | 39.95 | 54.18 |
| CDX73812 | Canola | endoplasmic reticulum, extracellular, vacuole | 53.89 | 54.03 |
| KRH24680 | Soybean | extracellular | 52.81 | 53.97 |
| CDY00787 | Canola | endoplasmic reticulum, extracellular, vacuole | 53.08 | 53.23 |
| CDY52664 | Canola | extracellular | 52.55 | 52.55 |
| CDY50534 | Canola | extracellular, vacuole | 52.01 | 52.01 |
| KRH29680 | Soybean | endoplasmic reticulum | 52.28 | 50.39 |
| GSMUA_Achr3P03820_001 | Banana | endoplasmic reticulum, extracellular | 49.87 | 50.0 |
| Os08t0505900-01 | Rice | extracellular | 50.67 | 49.74 |
| TraesCS7D01G243300.1 | Wheat | extracellular | 50.13 | 49.21 |
| TraesCS7B01G146800.1 | Wheat | extracellular | 49.87 | 48.95 |
| TraesCS7A01G244600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.87 | 48.95 |
| KRH24681 | Soybean | extracellular | 46.11 | 48.45 |
| Zm00001d031434_P001 | Maize | extracellular | 48.79 | 47.77 |
| HORVU7Hr1G050110.1 | Barley | vacuole | 49.6 | 47.68 |
| HORVU7Hr1G050140.1 | Barley | plastid | 49.6 | 47.44 |
| EES14271 | Sorghum | cytosol | 49.6 | 46.13 |
| CDY08451 | Canola | endoplasmic reticulum, extracellular | 28.69 | 32.82 |
| CDY42127 | Canola | extracellular | 28.15 | 32.21 |
| CDY08448 | Canola | extracellular | 27.61 | 31.5 |
| CDY42131 | Canola | extracellular | 27.08 | 31.27 |
| CDX70057 | Canola | extracellular | 27.88 | 30.95 |
| CDY42130 | Canola | extracellular | 27.08 | 30.89 |
| CDY58884 | Canola | extracellular | 27.35 | 30.82 |
| CDX70059 | Canola | extracellular | 27.35 | 30.54 |
| CDX98967 | Canola | extracellular | 27.35 | 30.36 |
| CDX98966 | Canola | extracellular | 27.08 | 30.24 |
| CDY08450 | Canola | extracellular | 26.01 | 30.03 |
| CDY58887 | Canola | extracellular | 26.54 | 30.0 |
| CDY42129 | Canola | cytosol | 26.01 | 29.94 |
| CDY52623 | Canola | extracellular, vacuole | 26.01 | 29.85 |
| CDY58888 | Canola | extracellular | 27.35 | 29.82 |
| CDX70060 | Canola | extracellular | 26.54 | 29.82 |
| CDX98965 | Canola | extracellular | 26.54 | 29.82 |
| CDX70058 | Canola | extracellular | 26.54 | 29.64 |
| CDY05006 | Canola | extracellular | 25.74 | 29.63 |
| CDY14065 | Canola | extracellular | 25.74 | 29.63 |
| CDY50569 | Canola | extracellular, vacuole | 25.47 | 29.23 |
| CDX81023 | Canola | extracellular | 26.01 | 28.36 |
| CDY58889 | Canola | extracellular | 26.01 | 27.95 |
| CDX93759 | Canola | endoplasmic reticulum, extracellular, vacuole | 11.53 | 26.38 |
| CDY15279 | Canola | plastid | 29.22 | 25.59 |
| CDX98968 | Canola | endoplasmic reticulum, extracellular, vacuole | 25.47 | 24.68 |
| CDY40923 | Canola | extracellular, vacuole | 30.56 | 24.31 |
| CDX88024 | Canola | extracellular, vacuole | 36.73 | 23.34 |
| CDX70056 | Canola | extracellular | 25.2 | 23.21 |
| CDY64876 | Canola | extracellular, vacuole | 36.19 | 23.16 |
| CDY38783 | Canola | extracellular | 24.93 | 22.68 |
| CDX80361 | Canola | extracellular, vacuole | 35.66 | 22.66 |
| CDY11623 | Canola | extracellular | 25.2 | 22.49 |
| CDY16850 | Canola | plastid | 29.22 | 22.02 |
| CDX93758 | Canola | plastid | 14.48 | 21.01 |
| CDX81022 | Canola | extracellular, plasma membrane | 21.98 | 16.21 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A078ISC9 | EnsemblPlants:CDY53975 | ProteinID:CDY53975 | ProteinID:CDY53975.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00011840001 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PFAM:PF00560 | PFAM:PF08263 | PFscan:PS51257 |
| PANTHER:PTHR44401 | PANTHER:PTHR44401:SF2 | SUPFAM:SSF52058 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EEECD6 |
| SEG:seg | : | : | : | : | : |
Description
BnaA10g30070DBnaA10g30070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISC9]
Coordinates
chrLK033258:+:62012..63133
Molecular Weight (calculated)
39957.2 Da
IEP (calculated)
10.355
GRAVY (calculated)
0.159
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAKNALVIV LTSIAVLLLA GAPTVVQACL PSERAALLEF RAKLNEPYIG VFKTWKGQDC CNGWYGVSCD PKSRRVSGIT LRGVSEEPIF QRAKRKGFMT
101: GTISPALCKL THLSGVTITD WEGISGVIPN CITNLLAMRH LDLAGNKISG VIPANIGKLT KLRVLTLADN KLSGGIPPSI TRLTSLSHLD LRNNYISGVI
201: PGDIGRLKML SRVLLTGNRI SGQIPESLTR IYRLADLELG MNRITGTIPV SLGKMSVLAT LDLHGNLISG AIPGSLMTSS ISNLNLRGNR LGGRIPNTFG
301: PRSYFTVLDL SNNRLQGAIP ASITTASFIG HIDVSYNQLC GKIPTGSHFG HLEAASFAYN RCLCGKPLGI CRK
101: GTISPALCKL THLSGVTITD WEGISGVIPN CITNLLAMRH LDLAGNKISG VIPANIGKLT KLRVLTLADN KLSGGIPPSI TRLTSLSHLD LRNNYISGVI
201: PGDIGRLKML SRVLLTGNRI SGQIPESLTR IYRLADLELG MNRITGTIPV SLGKMSVLAT LDLHGNLISG AIPGSLMTSS ISNLNLRGNR LGGRIPNTFG
301: PRSYFTVLDL SNNRLQGAIP ASITTASFIG HIDVSYNQLC GKIPTGSHFG HLEAASFAYN RCLCGKPLGI CRK
001: MDTKKSLVIL LTNVVVFLLL STTVHSCLPS DRAALLEFRA KLNEPYIGVF NTWKGLDCCK GWYGVSCDPN TRRVAGITLR GESEDPLFQK AKRSGLMTGS
101: ISPSICKLTR LSGIIIADWK GISGVIPSCI ENLPFLRHLD LVGNKFSGVI PANIGKLLRL KVLNLADNHL YGVIPPSITR LVSLSHLDLR NNNISGVIPR
201: DIGRLKMVSR VLLSGNKISG QIPDSLTRIY RLADLELSMN RLTGPIPASF GKMSVLATLN LDGNLISGMI PGSLLASSIS NLNLSGNLIT GSIPNTFGPR
301: SYFTVLDLAN NRLQGPIPAS ITAASFIGHL DVSHNHLCGK IPMGSPFDHL DATSFAYNAC LCGKPLGNCK K
101: ISPSICKLTR LSGIIIADWK GISGVIPSCI ENLPFLRHLD LVGNKFSGVI PANIGKLLRL KVLNLADNHL YGVIPPSITR LVSLSHLDLR NNNISGVIPR
201: DIGRLKMVSR VLLSGNKISG QIPDSLTRIY RLADLELSMN RLTGPIPASF GKMSVLATLN LDGNLISGMI PGSLLASSIS NLNLSGNLIT GSIPNTFGPR
301: SYFTVLDLAN NRLQGPIPAS ITAASFIGHL DVSHNHLCGK IPMGSPFDHL DATSFAYNAC LCGKPLGNCK K
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LXU5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.