Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42130 | Canola | extracellular | 96.94 | 96.94 |
| CDY08450 | Canola | extracellular | 88.99 | 90.09 |
| CDY42131 | Canola | extracellular | 86.85 | 87.93 |
| CDY42129 | Canola | cytosol | 85.02 | 85.8 |
| CDY42127 | Canola | extracellular | 68.5 | 68.71 |
| CDY08451 | Canola | endoplasmic reticulum, extracellular | 67.89 | 68.1 |
| CDY52623 | Canola | extracellular, vacuole | 67.58 | 68.0 |
| CDY50569 | Canola | extracellular, vacuole | 67.58 | 68.0 |
| CDY05006 | Canola | extracellular | 59.02 | 59.57 |
| CDY14065 | Canola | extracellular | 57.8 | 58.33 |
| CDX98965 | Canola | extracellular | 49.24 | 48.49 |
| CDY58884 | Canola | extracellular | 48.93 | 48.34 |
| CDX70059 | Canola | extracellular | 48.93 | 47.9 |
| CDX70058 | Canola | extracellular | 48.93 | 47.9 |
| CDY58887 | Canola | extracellular | 48.32 | 47.88 |
| CDY58888 | Canola | extracellular | 49.54 | 47.37 |
| CDX98966 | Canola | extracellular | 48.32 | 47.31 |
| CDX70060 | Canola | extracellular | 48.01 | 47.29 |
| CDX81023 | Canola | extracellular | 48.62 | 46.49 |
| CDX70057 | Canola | extracellular | 47.4 | 46.13 |
| CDX98967 | Canola | extracellular | 47.4 | 46.13 |
| CDY58889 | Canola | extracellular | 47.09 | 44.38 |
| CDX98968 | Canola | endoplasmic reticulum, extracellular, vacuole | 48.62 | 41.3 |
| CDX70056 | Canola | extracellular | 48.93 | 39.51 |
| CDX85681 | Canola | extracellular | 32.11 | 30.43 |
| CDX91155 | Canola | extracellular | 32.11 | 30.35 |
| CDX73812 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.42 | 28.49 |
| CDY60388 | Canola | extracellular | 31.8 | 28.49 |
| CDY00787 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.11 | 28.23 |
| CDY53975 | Canola | extracellular | 31.5 | 27.61 |
| CDY27559 | Canola | extracellular | 30.58 | 27.4 |
| CDY19601 | Canola | extracellular | 30.58 | 27.4 |
| CDY52664 | Canola | extracellular | 31.19 | 27.35 |
| CDY68308 | Canola | extracellular | 31.19 | 27.27 |
| CDX81022 | Canola | extracellular, plasma membrane | 42.2 | 27.27 |
| CDY06385 | Canola | extracellular | 30.28 | 27.12 |
| CDY69775 | Canola | extracellular, plasma membrane | 31.19 | 27.06 |
| CDY50534 | Canola | extracellular, vacuole | 30.58 | 26.81 |
| CDY69275 | Canola | extracellular | 30.58 | 26.74 |
| CDY38783 | Canola | extracellular | 25.69 | 20.49 |
| CDX93759 | Canola | endoplasmic reticulum, extracellular, vacuole | 10.09 | 20.25 |
| CDY11623 | Canola | extracellular | 25.69 | 20.1 |
| CDY40923 | Canola | extracellular, vacuole | 28.75 | 20.04 |
| CDY15279 | Canola | plastid | 25.69 | 19.72 |
| CDX88024 | Canola | extracellular, vacuole | 32.42 | 18.06 |
| CDX80361 | Canola | extracellular, vacuole | 32.42 | 18.06 |
| CDX93758 | Canola | plastid | 14.07 | 17.9 |
| CDY64876 | Canola | extracellular, vacuole | 31.5 | 17.67 |
| CDY16850 | Canola | plastid | 25.08 | 16.57 |
Protein Annotations
| EnsemblPlants:CDY08448 | EnsemblPlantsGene:GSBRNA2T00000211001 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| PANTHER:PTHR44138 | PFAM:PF08263 | PFscan:PS51257 | ProteinID:CDY08448 | ProteinID:CDY08448.1 | SEG:seg |
| SignalP:SignalP-noTM | SUPFAM:SSF52058 | UniParc:UPI0004EE3BD0 | UniProt:A0A078F9J3 | MapMan:26.8.3.4 | : |
Description
BnaA05g26840DBnaA05g26840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9J3]
Coordinates
chrLK031986:+:222330..223810
Molecular Weight (calculated)
36575.4 Da
IEP (calculated)
9.606
GRAVY (calculated)
-0.112
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLLIRLFIF FAALFISSLP SSYSCNPKDK NTLLQIKKHF NNPKLLSSWD PQTDCCTSWT GIECTNGRVT LFSMASDDSV VGQIPDQIGD LPELRTLEMS
101: SMNLTGNIPR SITKLKHLVL IFLSWNKLSG PIPDYISELK SVTFLDISFN KFTGPIPGWL TQMPKLQTFQ ADNNSLTGPI PNSFGSFVGN VPNVFLPYNK
201: LSGKIPESLS KIDFQAIVLK GNGFTGDGSM FFGGNKRTVQ LDLSRNLFEF DLSKVKFGKS MALLDLSHNR IFGTLPRELT QLHLERFNIS YNRLCGKIPR
301: GGQLQTFKSY EFAENRCLCG SPLKKAC
101: SMNLTGNIPR SITKLKHLVL IFLSWNKLSG PIPDYISELK SVTFLDISFN KFTGPIPGWL TQMPKLQTFQ ADNNSLTGPI PNSFGSFVGN VPNVFLPYNK
201: LSGKIPESLS KIDFQAIVLK GNGFTGDGSM FFGGNKRTVQ LDLSRNLFEF DLSKVKFGKS MALLDLSHNR IFGTLPRELT QLHLERFNIS YNRLCGKIPR
301: GGQLQTFKSY EFAENRCLCG SPLKKAC
001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
Arabidopsis Description
FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.