Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58889 | Canola | extracellular | 58.1 | 84.73 |
| CDY58887 | Canola | extracellular | 47.43 | 72.73 |
| CDY58884 | Canola | extracellular | 47.04 | 71.9 |
| CDX81023 | Canola | extracellular | 48.42 | 71.64 |
| CDY58888 | Canola | extracellular | 48.42 | 71.64 |
| AT5G06870.1 | Thale cress | extracellular | 43.08 | 66.06 |
| CDX98968 | Canola | endoplasmic reticulum, extracellular, vacuole | 49.8 | 65.45 |
| CDX98965 | Canola | extracellular | 41.3 | 62.95 |
| CDX70060 | Canola | extracellular | 41.11 | 62.65 |
| CDX98966 | Canola | extracellular | 41.11 | 62.28 |
| CDX70058 | Canola | extracellular | 41.11 | 62.28 |
| CDX70059 | Canola | extracellular | 41.11 | 62.28 |
| CDX70056 | Canola | extracellular | 48.81 | 60.99 |
| CDX70057 | Canola | extracellular | 39.53 | 59.52 |
| CDX98967 | Canola | extracellular | 39.13 | 58.93 |
| VIT_08s0007g07690.t01 | Wine grape | extracellular | 33.79 | 49.71 |
| PGSC0003DMT400057136 | Potato | extracellular | 31.42 | 48.48 |
| Solyc07g065090.1.1 | Tomato | extracellular | 31.23 | 48.32 |
| KRH12977 | Soybean | nucleus | 32.21 | 48.08 |
| KRG95348 | Soybean | mitochondrion | 33.2 | 47.86 |
| CDY52623 | Canola | extracellular, vacuole | 29.05 | 45.23 |
| CDY50569 | Canola | extracellular, vacuole | 28.66 | 44.62 |
| CDY05006 | Canola | extracellular | 28.46 | 44.44 |
| KRH12976 | Soybean | cytosol | 32.61 | 44.35 |
| CDY14065 | Canola | extracellular | 27.67 | 43.21 |
| CDY42130 | Canola | extracellular | 27.67 | 42.81 |
| CDY08448 | Canola | extracellular | 27.27 | 42.2 |
| CDY42131 | Canola | extracellular | 26.88 | 42.11 |
| CDY08451 | Canola | endoplasmic reticulum, extracellular | 26.88 | 41.72 |
| CDY42127 | Canola | extracellular | 26.88 | 41.72 |
| CDY08450 | Canola | extracellular | 25.89 | 40.56 |
| CDY42129 | Canola | cytosol | 25.69 | 40.12 |
| GSMUA_Achr9P12430_001 | Banana | extracellular | 23.72 | 39.74 |
| Os05t0104200-01 | Rice | extracellular | 23.12 | 37.86 |
| TraesCS3D01G451800.1 | Wheat | extracellular | 25.1 | 37.35 |
| TraesCS3A01G459200.1 | Wheat | extracellular | 25.1 | 37.35 |
| Zm00001d035753_P001 | Maize | extracellular | 25.1 | 37.24 |
| TraesCS3D01G451400.1 | Wheat | extracellular | 24.7 | 36.87 |
| TraesCS3B01G498900.1 | Wheat | extracellular | 24.7 | 36.76 |
| EES17529 | Sorghum | extracellular | 24.7 | 36.66 |
| TraesCS3D01G451900.1 | Wheat | extracellular | 24.51 | 36.58 |
| TraesCS7D01G200000.1 | Wheat | cytosol | 22.53 | 36.42 |
| HORVU3Hr1G098610.1 | Barley | extracellular | 24.11 | 36.31 |
| Os05t0104150-01 | Rice | extracellular | 24.51 | 36.26 |
| HORVU3Hr1G098730.2 | Barley | endoplasmic reticulum, extracellular, mitochondrion | 25.49 | 36.13 |
| TraesCS1A01G012600.1 | Wheat | extracellular | 23.91 | 36.01 |
| EES17528 | Sorghum | extracellular | 24.11 | 35.99 |
| TraesCS1D01G010800.1 | Wheat | extracellular | 23.91 | 35.91 |
| TraesCS3A01G459000.1 | Wheat | extracellular | 24.11 | 35.78 |
| Os05t0104600-01 | Rice | extracellular | 23.91 | 35.69 |
| TraesCS3D01G451500.1 | Wheat | extracellular | 23.52 | 35.63 |
| Zm00001d035756_P001 | Maize | vacuole | 24.11 | 34.86 |
| TraesCS1B01G017300.1 | Wheat | extracellular | 23.12 | 34.72 |
| TraesCS7B01G103900.1 | Wheat | extracellular | 22.53 | 33.83 |
| TraesCS3A01G459300.1 | Wheat | cytosol | 9.88 | 33.78 |
| EES17527 | Sorghum | extracellular, plastid | 25.3 | 32.57 |
| HORVU1Hr1G002410.1 | Barley | endoplasmic reticulum, vacuole | 23.52 | 32.34 |
| TraesCS2A01G470500.1 | Wheat | extracellular | 21.54 | 31.87 |
| TraesCS2D01G470400.1 | Wheat | extracellular | 21.54 | 31.87 |
| TraesCS2D01G470500.1 | Wheat | extracellular, vacuole | 21.54 | 31.78 |
| Os05t0104700-01 | Rice | extracellular | 25.1 | 31.67 |
| TraesCS2B01G493200.1 | Wheat | endoplasmic reticulum, extracellular | 20.95 | 30.99 |
| HORVU2Hr1G106620.1 | Barley | extracellular | 20.55 | 30.59 |
| TraesCS2B01G493300.1 | Wheat | extracellular | 20.75 | 30.43 |
| TraesCS2A01G470600.1 | Wheat | extracellular | 20.16 | 30.18 |
| TraesCS7A01G197500.1 | Wheat | extracellular | 10.47 | 28.96 |
| CDY52664 | Canola | extracellular | 18.38 | 24.93 |
| CDY50534 | Canola | extracellular, vacuole | 17.98 | 24.4 |
| CDX85681 | Canola | extracellular | 16.6 | 24.35 |
| CDY19601 | Canola | extracellular | 17.39 | 24.11 |
| CDX91155 | Canola | extracellular | 16.4 | 23.99 |
| CDY60388 | Canola | extracellular | 17.19 | 23.84 |
| CDY00787 | Canola | endoplasmic reticulum, extracellular, vacuole | 17.39 | 23.66 |
| CDX73812 | Canola | endoplasmic reticulum, extracellular, vacuole | 17.39 | 23.66 |
| CDY27559 | Canola | extracellular | 17.0 | 23.56 |
| CDY06385 | Canola | extracellular | 17.0 | 23.56 |
| CDY68308 | Canola | extracellular | 16.6 | 22.46 |
| CDY69775 | Canola | extracellular, plasma membrane | 16.6 | 22.28 |
| CDY53975 | Canola | extracellular | 16.21 | 21.98 |
| CDY69275 | Canola | extracellular | 16.01 | 21.66 |
| CDX93759 | Canola | endoplasmic reticulum, extracellular, vacuole | 6.32 | 19.63 |
| CDY40923 | Canola | extracellular, vacuole | 16.8 | 18.12 |
| CDY15279 | Canola | plastid | 15.02 | 17.84 |
| CDY38783 | Canola | extracellular | 14.23 | 17.56 |
| CDY11623 | Canola | extracellular | 14.03 | 16.99 |
| CDX88024 | Canola | extracellular, vacuole | 19.37 | 16.7 |
| CDX80361 | Canola | extracellular, vacuole | 19.17 | 16.52 |
| CDY64876 | Canola | extracellular, vacuole | 18.18 | 15.78 |
| CDY16850 | Canola | plastid | 14.23 | 14.55 |
| CDX93758 | Canola | plastid | 7.31 | 14.4 |
Protein Annotations
| EnsemblPlants:CDX81022 | EnsemblPlantsGene:GSBRNA2T00134455001 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| PANTHER:PTHR44138 | PFAM:PF08263 | ProteinID:CDX81022 | ProteinID:CDX81022.1 | SEG:seg | SUPFAM:SSF52058 |
| UniParc:UPI0004EEB7DA | MapMan:26.8.3.4 | : | : | : | : |
Description
BnaC03g02760D
Coordinates
chrLK031823:+:1365823..1373895
Molecular Weight (calculated)
56219.0 Da
IEP (calculated)
7.719
GRAVY (calculated)
-0.085
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MHYPTTTMLT FIALAYKSSE FSLERKHTMD KITTTFLFSL LALLLTTTLS KDLCHKDDEN TLLKIKKSLN NPYTIISWDP KDDCCTWVSV ECGDATVDHR
101: VISLDISNDD VSAQIPPEVG DLPYLQTLIF RKLPNLTGEI QPTIAKLKYL RFLWLSWTHL TGPVPEFLSQ LKDLEYINLS FNDLSGSIPG SLSLLPKLGI
201: LELSRNKLTG SIPESFGAFK GVVPPELFLS HNQLSGSIPK SLGNLDFHRI DFSRNKLEGD ASMMFGAKKT SWSVDLSRNK LQFDISKVKV ATTVHNLDLN
301: HNRITGGIPV QWTELTLQSF NMLCCCSCPH STENLVHHMK AWMDTCASRT KIRVEGFNTS SDRLVLLRAL KDLFETCGVK NKNIEIRVDP VVLSCLVILL
401: GEGAKEKALL LNGSQVGGRK LTLSAVERTD GLTTSGRAAK FVADFQKNSS VLVHLYGLGS LQRAVQLNGT DLGGGFTLTV EAMPYPKREK AEAEYAIPDD
501: ITKTLY
101: VISLDISNDD VSAQIPPEVG DLPYLQTLIF RKLPNLTGEI QPTIAKLKYL RFLWLSWTHL TGPVPEFLSQ LKDLEYINLS FNDLSGSIPG SLSLLPKLGI
201: LELSRNKLTG SIPESFGAFK GVVPPELFLS HNQLSGSIPK SLGNLDFHRI DFSRNKLEGD ASMMFGAKKT SWSVDLSRNK LQFDISKVKV ATTVHNLDLN
301: HNRITGGIPV QWTELTLQSF NMLCCCSCPH STENLVHHMK AWMDTCASRT KIRVEGFNTS SDRLVLLRAL KDLFETCGVK NKNIEIRVDP VVLSCLVILL
401: GEGAKEKALL LNGSQVGGRK LTLSAVERTD GLTTSGRAAK FVADFQKNSS VLVHLYGLGS LQRAVQLNGT DLGGGFTLTV EAMPYPKREK AEAEYAIPDD
501: ITKTLY
001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
Arabidopsis Description
FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.