Factsheet for TraesCS2B01G493200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	91.23	90.96
HORVU2Hr1G106620.1	Barley	extracellular	89.77	90.29
TraesCS2A01G470600.1	Wheat	extracellular	85.09	86.09
TraesCS2B01G493300.1	Wheat	extracellular	68.71	68.12
TraesCS3B01G498900.1	Wheat	extracellular	50.0	50.29
Os05t0104600-01	Rice	extracellular	48.25	48.67
TraesCS7B01G103900.1	Wheat	extracellular	47.08	47.77
TraesCS1B01G017300.1	Wheat	extracellular	45.03	45.7
Os05t0104700-01	Rice	extracellular	50.58	43.14
Solyc09g014590.2.1	Tomato	extracellular	39.18	42.95
Bra005918.1-P	Field mustard	extracellular	25.73	42.93
Solyc09g014480.1.1	Tomato	extracellular	41.52	42.39
Bra009237.1-P	Field mustard	extracellular	40.94	41.67
CDX70057	Canola	extracellular	40.35	41.07
Bra009236.1-P	Field mustard	extracellular	40.06	41.02
Bra009234.1-P	Field mustard	extracellular	39.47	40.79
PGSC0003DMT400021883	Potato	extracellular	39.77	40.72
CDX70060	Canola	extracellular	39.47	40.66
CDX98965	Canola	extracellular	39.47	40.66
CDX70058	Canola	extracellular	39.18	40.12
CDX98966	Canola	extracellular	39.18	40.12
GSMUA_Achr9P12430_001	Banana	extracellular	35.38	40.07
CDX70059	Canola	extracellular	38.89	39.82
Bra009235.1-P	Field mustard	extracellular	38.89	39.82
CDX98967	Canola	extracellular	38.89	39.58
VIT_13s0064g01370.t01	Wine grape	extracellular	38.3	39.46
AT5G06870.1	Thale cress	extracellular	38.01	39.39
CDY58884	Canola	extracellular	37.43	38.67
CDX81023	Canola	extracellular	38.6	38.6
KRG95348	Soybean	mitochondrion	39.47	38.46
Bra005919.1-P	Field mustard	extracellular	37.13	38.37
Bra005917.1-P	Field mustard	extracellular	38.3	38.3
CDY58888	Canola	extracellular	38.3	38.3
AT5G06860.1	Thale cress	extracellular	36.84	38.18
CDY58887	Canola	extracellular	36.26	37.58
TraesCS2B01G226900.1	Wheat	extracellular	36.55	37.43
TraesCS5B01G265900.1	Wheat	extracellular	38.6	37.39
KRH12977	Soybean	nucleus	36.84	37.17
Bra009238.1-P	Field mustard	extracellular	35.96	37.05
TraesCS2B01G353300.1	Wheat	extracellular	35.38	36.89
Bra005916.1-P	Field mustard	extracellular	36.55	36.02
TraesCS7B01G094700.1	Wheat	plastid	35.67	35.26
CDY58889	Canola	extracellular	35.67	35.16
KRH12976	Soybean	cytosol	37.13	34.14
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	35.67	31.69
CDX70056	Canola	extracellular	35.96	30.37
TraesCS7B01G146800.1	Wheat	extracellular	29.53	26.58
TraesCS2B01G590900.1	Wheat	extracellular	28.95	22.15
CDX81022	Canola	extracellular, plasma membrane	30.99	20.95

Protein Annotations

EnsemblPlants:TraesCS2B01G493200.1	EnsemblPlantsGene:TraesCS2B01G493200	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138
PFAM:PF00560	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	MapMan:26.8.3.4

Description

No Description!

Coordinates

chr2B:-:690962852..690963880

Molecular Weight (calculated)

36089.1 Da

IEP (calculated)

6.069

GRAVY (calculated)

0.192

Length

342 amino acids

Sequence
(BLAST)

001: MRASSLVDHC ATSLVVVVLL TAAAAARTNN ECHSGDKAAL LAIKSAFGNA SYFNSWTPDT PCCEWTSVSC SGDGSAAARR VVGVSLVDDA SLAGPLPGAA
101: IARLTALQQL VLNNVPGVNG TIPRDLTRLN ATLGLLDIIS TGISGPVPSF LSEITALSYL SLSSNKLTGP IPASLGDMPN LYFLDLGYNR LTGTIPPLLL
201: RKASDAYLYL SHNKLTGGVP AEFAAVHFWT IDLSYNGFKG DASSLFGANK PLLNVDLSHN AFSFNLSGVQ LPEGLNSLEL SHNDIYGDIP EMVVDMMLNY
301: LNVSYNRLSG VVPAGGNMAW FDQSCFQHNK GLCGSPLPPC KH

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.