Factsheet for TraesCS2B01G226900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G207200.1	Wheat	extracellular	98.8	98.8
TraesCS2A01G199600.1	Wheat	extracellular	95.81	95.52
HORVU2Hr1G038990.1	Barley	plastid	93.71	85.75
Os07t0568700-02	Rice	extracellular	79.04	79.52
Zm00001d006623_P001	Maize	extracellular	74.55	75.23
EER99569	Sorghum	extracellular	73.65	73.87
Zm00001d021836_P001	Maize	extracellular	73.35	73.8
TraesCS5B01G265900.1	Wheat	extracellular	44.61	42.21
TraesCS1B01G017300.1	Wheat	extracellular	40.12	39.76
TraesCS3B01G498900.1	Wheat	extracellular	40.12	39.41
TraesCS2B01G353300.1	Wheat	extracellular	38.32	39.02
TraesCS7B01G103900.1	Wheat	extracellular	38.32	37.98
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	37.43	36.55
TraesCS2B01G493300.1	Wheat	extracellular	37.43	36.23
TraesCS7B01G146800.1	Wheat	extracellular	34.13	30.0
TraesCS7B01G094700.1	Wheat	plastid	30.84	29.77
TraesCS2B01G590900.1	Wheat	extracellular	29.34	21.92

Protein Annotations

MapMan:26.8.3.4	Gene3D:3.80.10.10	GO:GO:0000003	GO:GO:0003674	GO:GO:0004857	GO:GO:0005488
GO:GO:0005515	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791	GO:GO:0009908	GO:GO:0030234
GO:GO:0048833	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR44138
PANTHER:PTHR44138:SF5	SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2B01G226900	EnsemblPlants:TraesCS2B01G226900.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:217433307..217434550

Molecular Weight (calculated)

36291.5 Da

IEP (calculated)

7.270

GRAVY (calculated)

-0.106

Length

334 amino acids

Sequence
(BLAST)

001: MASTASFLPL LALLLVATAH CSPLPQRCPQ ADRQALFRVK QALGSPLTLK TWSPASADCC AWDHLTCNEA GRVNNVFIDG ADDVRGQIPS ALAGLTALMS
101: LSLFRLPGLQ GSIPACLTSL SKLEFLTVSH TNVSGSIPES LARLHSLDSV DLSNNKLTGS IPNSFADMPN LRSLDLRRNQ LTGRIPASLV QGQFRSLVLS
201: YNQLTGPIPR DDAQDEINTV DLSHNQLSGD ASFLFSEGRP IGKVDLSYNN LEFDLSKLKF PKELTYLDLS HNRISGTVPR SLEALSTLQT LDLSYNNLCG
301: PLPKLHGVMR HGCKPYEHNL CHRGAPLESS CHQL

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.