Factsheet for TraesCS3B01G498900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G459200.1	Wheat	extracellular	95.59	95.59
TraesCS3D01G451800.1	Wheat	extracellular	95.29	95.29
TraesCS3D01G451400.1	Wheat	extracellular	90.59	90.86
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	95.0	90.48
TraesCS3A01G459000.1	Wheat	extracellular	85.0	84.75
EES17528	Sorghum	extracellular	70.59	70.8
TraesCS1B01G017300.1	Wheat	extracellular	59.12	59.64
TraesCS7B01G103900.1	Wheat	extracellular	58.82	59.35
TraesCS2B01G493300.1	Wheat	extracellular	51.47	50.72
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	50.29	50.0
CDX70058	Canola	extracellular	47.94	48.8
Bra009236.1-P	Field mustard	extracellular	47.94	48.8
Bra005918.1-P	Field mustard	extracellular	29.12	48.29
CDX98965	Canola	extracellular	47.06	48.19
Bra009234.1-P	Field mustard	extracellular	46.76	48.04
CDX98966	Canola	extracellular	47.06	47.9
CDX70060	Canola	extracellular	46.76	47.89
Bra009237.1-P	Field mustard	extracellular	47.06	47.62
CDX70057	Canola	extracellular	47.06	47.62
AT5G06860.1	Thale cress	extracellular	46.18	47.58
CDX98967	Canola	extracellular	46.76	47.32
CDX70059	Canola	extracellular	46.47	47.31
Bra009235.1-P	Field mustard	extracellular	46.18	47.01
GSMUA_Achr9P12430_001	Banana	extracellular	41.47	46.69
AT5G06870.1	Thale cress	extracellular	45.0	46.36
VIT_13s0064g01370.t01	Wine grape	extracellular	45.0	46.08
CDX81023	Canola	extracellular	46.18	45.91
KRG95348	Soybean	mitochondrion	47.35	45.87
Bra005917.1-P	Field mustard	extracellular	45.88	45.61
CDY58888	Canola	extracellular	45.59	45.32
CDY58884	Canola	extracellular	44.12	45.32
CDY58887	Canola	extracellular	43.82	45.15
Bra005919.1-P	Field mustard	extracellular	43.82	45.02
Bra009238.1-P	Field mustard	extracellular	43.82	44.88
PGSC0003DMT400021883	Potato	extracellular	42.35	43.11
Solyc09g014590.2.1	Tomato	extracellular	39.12	42.63
KRH12977	Soybean	nucleus	42.35	42.48
Solyc09g014480.1.1	Tomato	extracellular	41.76	42.39
Bra005916.1-P	Field mustard	extracellular	42.65	41.79
CDY58889	Canola	extracellular	42.06	41.21
KRH12976	Soybean	cytosol	45.0	41.13
TraesCS5B01G265900.1	Wheat	extracellular	42.06	40.51
TraesCS2B01G226900.1	Wheat	extracellular	39.41	40.12
TraesCS2B01G353300.1	Wheat	extracellular	38.53	39.94
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	43.82	38.7
CDX70056	Canola	extracellular	43.82	36.79
TraesCS7B01G094700.1	Wheat	plastid	35.88	35.26
TraesCS7B01G146800.1	Wheat	extracellular	32.65	29.21
TraesCS2B01G590900.1	Wheat	extracellular	33.24	25.28
CDX81022	Canola	extracellular, plasma membrane	36.76	24.7

Protein Annotations

EnsemblPlants:TraesCS3B01G498900.1	EnsemblPlantsGene:TraesCS3B01G498900	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
PANTHER:PTHR44138	PFAM:PF08263	PFscan:PS51257	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
MapMan:26.8.3.4	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:742255433..742256455

Molecular Weight (calculated)

36364.8 Da

IEP (calculated)

7.477

GRAVY (calculated)

0.171

Length

340 amino acids

Sequence
(BLAST)

001: MRMRSRALLV LLLCSLLACA ANAEPSPDPT YKDCHPGDNA ALLAVKAALG EAYHFASWTP DSPCCDWYDV TCDHFTGRVV GLAVFQDANL TGTIPSALAG
101: LPHLQDLTLR HLPALSGPIP PAIGKLSNLS SLRISWTAVS GPVPSFLGAL KKLTFLELSF NSLSGAIPAS LGTISNLSGI NLSRNRLTGA IPPMFLSKFA
201: DQVYLWLSHN NLTGPVPAGF ASVNFAHLDL SRNDLTGDAS GLLGRGKELQ YIDLSRNAFD FDLSGVVLPE QLYFVDVSHN AIHGSIPAQV ANLSNLQFFN
301: VSYNRLCGPV PTGGTMARFD LYNFQHNKCL CGAPLPACKK

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.