Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G082140.1 | Barley | extracellular | 91.77 | 91.49 |
| HORVU2Hr1G082160.1 | Barley | cytosol | 85.67 | 90.35 |
| Zm00001d003317_P001 | Maize | extracellular | 62.2 | 60.71 |
| OQU81782 | Sorghum | extracellular | 63.11 | 60.17 |
| TraesCS3B01G498900.1 | Wheat | extracellular | 39.94 | 38.53 |
| TraesCS2B01G226900.1 | Wheat | extracellular | 39.02 | 38.32 |
| TraesCS5B01G265900.1 | Wheat | extracellular | 41.16 | 38.24 |
| TraesCS7B01G103900.1 | Wheat | extracellular | 37.8 | 36.8 |
| TraesCS2B01G493200.1 | Wheat | endoplasmic reticulum, extracellular | 36.89 | 35.38 |
| TraesCS1B01G017300.1 | Wheat | extracellular | 36.28 | 35.31 |
| TraesCS2B01G493300.1 | Wheat | extracellular | 35.37 | 33.62 |
| TraesCS7B01G094700.1 | Wheat | plastid | 30.49 | 28.9 |
| TraesCS7B01G146800.1 | Wheat | extracellular | 28.66 | 24.74 |
| TraesCS2B01G590900.1 | Wheat | extracellular | 28.66 | 21.03 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G353300.1 | EnsemblPlantsGene:TraesCS2B01G353300 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PANTHER:PTHR44138 | PANTHER:PTHR44138:SF3 |
| PFAM:PF00560 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52058 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2B:-:504317905..504318891
Molecular Weight (calculated)
36440.1 Da
IEP (calculated)
9.831
GRAVY (calculated)
-0.160
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MANHVALLLL LSLQLTASFS QQPGDDPDFR TLLKIKEQFG DQAALVSLLP GTDQCNWPYA YCNEHRRVVA IFLQNVNITS TIPPAIGDLD QLHTISIHSI
101: PGLHGPIPDT FGKLSHLSIF NIMRTSVSGS LPASLSRTNL TSVSFFGNKL TGRIPRSLQD LPYLTYFDAS NNRLVGRIPP RLVSNGARDR PLGLTLTNNR
201: LTGPIPRTYA RERYFMNFRV ANNRLTGDAA FLFGRRNTVY DIDLSGNRLR FNLTGVVMPE NLLFLNMSRN RIYGGVPASL TQLKKLTTLD LSYNQLCGEI
301: PTGGNMGRFK PETYEHNKCL CGTPLPTC
101: PGLHGPIPDT FGKLSHLSIF NIMRTSVSGS LPASLSRTNL TSVSFFGNKL TGRIPRSLQD LPYLTYFDAS NNRLVGRIPP RLVSNGARDR PLGLTLTNNR
201: LTGPIPRTYA RERYFMNFRV ANNRLTGDAA FLFGRRNTVY DIDLSGNRLR FNLTGVVMPE NLLFLNMSRN RIYGGVPASL TQLKKLTTLD LSYNQLCGEI
301: PTGGNMGRFK PETYEHNKCL CGTPLPTC
001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
Arabidopsis Description
FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.