Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G082140.1 | Barley | extracellular | 92.93 | 87.84 |
| TraesCS2B01G353300.1 | Wheat | extracellular | 90.35 | 85.67 |
| Zm00001d003317_P001 | Maize | extracellular | 62.38 | 57.74 |
| OQU81782 | Sorghum | extracellular | 62.7 | 56.69 |
| HORVU5Hr1G073500.1 | Barley | extracellular, vacuole | 42.12 | 37.43 |
| HORVU3Hr1G098610.1 | Barley | extracellular | 39.87 | 36.9 |
| HORVU3Hr1G098730.2 | Barley | endoplasmic reticulum, extracellular, mitochondrion | 41.8 | 36.41 |
| HORVU2Hr1G106620.1 | Barley | extracellular | 38.91 | 35.59 |
| HORVU2Hr1G038990.1 | Barley | plastid | 39.87 | 33.97 |
| HORVU1Hr1G002410.1 | Barley | endoplasmic reticulum, vacuole | 39.55 | 33.42 |
| HORVU7Hr1G038570.1 | Barley | mitochondrion | 32.15 | 33.33 |
| HORVU7Hr1G050110.1 | Barley | vacuole | 30.55 | 24.48 |
| HORVU7Hr1G050140.1 | Barley | plastid | 30.55 | 24.36 |
| HORVU2Hr1G119550.1 | Barley | cytosol | 18.33 | 16.24 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G082160.1 | EnsemblPlantsGene:HORVU2Hr1G082160 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| PANTHER:PTHR44138 | PANTHER:PTHR44138:SF3 | PFAM:PF08263 | SEG:seg | SUPFAM:SSF52058 | UniParc:UPI000B4601B0 |
| UniProt:A0A287IMZ9 | MapMan:26.8.3.4 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:596782964..596783968
Molecular Weight (calculated)
34416.5 Da
IEP (calculated)
9.579
GRAVY (calculated)
-0.175
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: SFSQQPGDDP DLPTLLKIKE QFGEQAALAS WQPGTDHCNW AYAYCNQYRR VVAIFLQNVN ITSTIPPAIG DLDQLHTISI DNIPGLHGPI PDTFGKLSRL
101: SIFNIMRTSV SGSLPASLSR TNLTSVSFFG NMLTGRIPMS LQDLPHLTYF DASNNRLVGR IPPRLVSNGT RDSPLGLTLT NNRLTGPIPR TYARERYFMN
201: FRVANNMLTG DAAFLFGRRK TVSDVDLSGN RLNFNLTGVV MPKNLLFLNM SRNRIYGGVP ASLAQLKWLV TLDLSYNRLC GEIPTGGNMG RFKAEAYEHN
301: KCLCGTPLPT C
101: SIFNIMRTSV SGSLPASLSR TNLTSVSFFG NMLTGRIPMS LQDLPHLTYF DASNNRLVGR IPPRLVSNGT RDSPLGLTLT NNRLTGPIPR TYARERYFMN
201: FRVANNMLTG DAAFLFGRRK TVSDVDLSGN RLNFNLTGVV MPKNLLFLNM SRNRIYGGVP ASLAQLKWLV TLDLSYNRLC GEIPTGGNMG RFKAEAYEHN
301: KCLCGTPLPT C
001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
Arabidopsis Description
FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.