Factsheet for HORVU3Hr1G098610.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G451500.1	Wheat	extracellular	89.88	90.42
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	76.49	71.99
EES17528	Sorghum	extracellular	64.58	64.01
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	55.06	50.27
HORVU2Hr1G106620.1	Barley	extracellular	49.4	48.82
Bra005918.1-P	Field mustard	extracellular	29.46	48.29
CDX70058	Canola	extracellular	46.73	47.01
Bra009236.1-P	Field mustard	extracellular	46.43	46.71
CDX98967	Canola	extracellular	45.24	45.24
Bra009237.1-P	Field mustard	extracellular	45.24	45.24
CDX70057	Canola	extracellular	45.24	45.24
CDX98966	Canola	extracellular	44.94	45.21
CDX70059	Canola	extracellular	44.64	44.91
Bra009235.1-P	Field mustard	extracellular	44.35	44.61
VIT_13s0064g01370.t01	Wine grape	extracellular	44.05	44.58
AT5G06860.1	Thale cress	extracellular	43.75	44.55
Bra009234.1-P	Field mustard	extracellular	43.75	44.41
Bra005919.1-P	Field mustard	extracellular	43.75	44.41
CDY58884	Canola	extracellular	43.75	44.41
CDX70060	Canola	extracellular	43.75	44.28
CDX98965	Canola	extracellular	43.75	44.28
CDY58887	Canola	extracellular	43.45	44.24
AT5G06870.1	Thale cress	extracellular	43.15	43.94
CDX81023	Canola	extracellular	44.64	43.86
PGSC0003DMT400021883	Potato	extracellular	43.45	43.71
Bra009238.1-P	Field mustard	extracellular	43.15	43.67
KRG95348	Soybean	mitochondrion	45.24	43.3
Bra005917.1-P	Field mustard	extracellular	44.05	43.27
CDY58888	Canola	extracellular	43.75	42.98
GSMUA_Achr9P12430_001	Banana	extracellular	38.1	42.38
Solyc09g014480.1.1	Tomato	extracellular	41.96	42.09
Bra005916.1-P	Field mustard	extracellular	42.26	40.92
Solyc09g014590.2.1	Tomato	extracellular	37.8	40.71
CDY58889	Canola	extracellular	41.96	40.63
HORVU2Hr1G082140.1	Barley	extracellular	39.29	40.12
KRH12977	Soybean	nucleus	40.48	40.12
HORVU2Hr1G082160.1	Barley	cytosol	36.9	39.87
HORVU5Hr1G073500.1	Barley	extracellular, vacuole	39.88	38.29
KRH12976	Soybean	cytosol	41.96	37.9
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	43.15	37.66
HORVU7Hr1G038570.1	Barley	mitochondrion	33.33	37.33
HORVU2Hr1G038990.1	Barley	plastid	39.29	36.16
CDX70056	Canola	extracellular	43.15	35.8
HORVU7Hr1G050110.1	Barley	vacuole	32.14	27.84
HORVU7Hr1G050140.1	Barley	plastid	32.14	27.69
CDX81022	Canola	extracellular, plasma membrane	36.31	24.11
HORVU2Hr1G119550.1	Barley	cytosol	18.45	17.66

Protein Annotations

EnsemblPlants:HORVU3Hr1G098610.1	EnsemblPlantsGene:HORVU3Hr1G098610	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138	PFAM:PF13855
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	UniParc:UPI000B463A05	UniProt:A0A287MGJ9	MapMan:26.8.3.4

Description

No Description!

Coordinates

chrchr3H:-:659501461..659502591

Molecular Weight (calculated)

36036.2 Da

IEP (calculated)

6.499

GRAVY (calculated)

0.128

Length

336 amino acids

Sequence
(BLAST)

001: MMRMHPHALL LLLFLFSVLA GGANAEPSRE LTYKDCHPDD KAVLLSFPES WSSSWTPDTP CCDWFAVACD RSTGRIVGFS VFQDPDFTGT IPSAIAGLTH
101: LQDLFLHHLP GLSGPIPPEI GKLSNLSRLE ISWTGVSGPV PSSLGALKKL AQLNLSFNSL SGAIPVSLGT IPGITLSRNR LTGAIPNMFL GESAGRDVYL
201: DVSHNNLTGA IPAEFAAVNF THLDLSRNAL TGDASGLFGR GKELQYIDLS RNAFDFDLSG VVVLPEKLFH LDLSHNAIHG SIPAQVADVA NLLAFNVSYN
301: RLCGAVPTGG NMARFDLYNF QHNKCLCGAP LPPCKN

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.