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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY58888 Canola extracellular 95.91 95.91
CDY58884 Canola extracellular 85.67 88.52
CDY58887 Canola extracellular 84.21 87.27
CDY58889 Canola extracellular 81.58 80.4
AT5G06870.1 Thale cress extracellular 68.13 70.61
CDX70060 Canola extracellular 65.5 67.47
CDX98965 Canola extracellular 65.5 67.47
CDX70058 Canola extracellular 65.5 67.07
CDX70059 Canola extracellular 64.91 66.47
CDX98966 Canola extracellular 64.62 66.17
CDX98968 Canola endoplasmic reticulum, extracellular, vacuole 73.98 65.71
CDX70057 Canola extracellular 64.33 65.48
CDX98967 Canola extracellular 63.45 64.58
CDX70056 Canola extracellular 73.1 61.73
VIT_08s0007g07690.t01 Wine grape extracellular 55.26 54.94
Solyc07g065090.1.1 Tomato extracellular 52.34 54.74
KRH12977 Soybean nucleus 53.51 53.98
PGSC0003DMT400057136 Potato extracellular 51.75 53.96
KRG95348 Soybean mitochondrion 54.09 52.71
TraesCS3A01G459300.1 Wheat cytosol 22.51 52.03
CDY05006 Canola extracellular 48.54 51.23
CDY52623 Canola extracellular, vacuole 48.25 50.77
CDY50569 Canola extracellular, vacuole 47.95 50.46
CDY14065 Canola extracellular 46.78 49.38
KRH12976 Soybean cytosol 53.51 49.19
CDY42127 Canola extracellular 46.78 49.08
CDY08448 Canola extracellular 46.49 48.62
CDX81022 Canola extracellular, plasma membrane 71.64 48.42
GSMUA_Achr9P12430_001 Banana extracellular 42.69 48.34
CDY42130 Canola extracellular 46.2 48.32
CDY42131 Canola extracellular 45.61 48.3
CDY08451 Canola endoplasmic reticulum, extracellular 45.91 48.16
TraesCS3D01G451800.1 Wheat extracellular 46.78 47.06
TraesCS3A01G459200.1 Wheat extracellular 46.78 47.06
TraesCS3B01G498900.1 Wheat extracellular 45.91 46.18
CDY08450 Canola extracellular 43.57 46.13
TraesCS3D01G451900.1 Wheat extracellular 45.32 45.72
TraesCS3D01G451400.1 Wheat extracellular 45.32 45.72
CDY42129 Canola cytosol 43.27 45.68
Os05t0104200-01 Rice extracellular 40.35 44.66
HORVU3Hr1G098610.1 Barley extracellular 43.86 44.64
TraesCS3A01G459000.1 Wheat extracellular 44.44 44.57
HORVU3Hr1G098730.2 Barley endoplasmic reticulum, extracellular, mitochondrion 46.2 44.26
Zm00001d035753_P001 Maize extracellular 43.57 43.7
TraesCS3D01G451500.1 Wheat extracellular 42.4 43.41
TraesCS1A01G012600.1 Wheat extracellular 42.4 43.15
TraesCS1D01G010800.1 Wheat extracellular 42.4 43.03
EES17528 Sorghum extracellular 42.11 42.48
EES17529 Sorghum extracellular 41.81 41.94
TraesCS7D01G200000.1 Wheat cytosol 38.3 41.85
TraesCS1B01G017300.1 Wheat extracellular 41.23 41.84
Os05t0104150-01 Rice extracellular 41.23 41.23
Os05t0104600-01 Rice extracellular 40.35 40.71
Zm00001d035756_P001 Maize vacuole 41.52 40.57
TraesCS7B01G103900.1 Wheat extracellular 39.47 40.06
TraesCS2D01G470400.1 Wheat extracellular 38.89 38.89
TraesCS2A01G470500.1 Wheat extracellular 38.89 38.89
TraesCS2B01G493200.1 Wheat endoplasmic reticulum, extracellular 38.6 38.6
HORVU2Hr1G106620.1 Barley extracellular 38.3 38.53
TraesCS2D01G470500.1 Wheat extracellular, vacuole 38.6 38.48
HORVU1Hr1G002410.1 Barley endoplasmic reticulum, vacuole 40.64 37.77
TraesCS2A01G470600.1 Wheat extracellular 37.13 37.57
TraesCS2B01G493300.1 Wheat extracellular 37.72 37.39
EES17527 Sorghum extracellular, plastid 42.11 36.64
Os05t0104700-01 Rice extracellular 40.94 34.91
TraesCS7A01G197500.1 Wheat extracellular 16.96 31.69
CDY52664 Canola extracellular 30.99 28.42
CDY19601 Canola extracellular 30.12 28.22
CDX85681 Canola extracellular 28.36 28.12
CDX73812 Canola endoplasmic reticulum, extracellular, vacuole 30.41 27.96
CDY00787 Canola endoplasmic reticulum, extracellular, vacuole 30.41 27.96
CDY50534 Canola extracellular, vacuole 30.41 27.88
CDX91155 Canola extracellular 28.07 27.75
CDY06385 Canola extracellular 29.53 27.67
CDY60388 Canola extracellular 29.24 27.4
CDY27559 Canola extracellular 28.95 27.12
CDY53975 Canola extracellular 28.36 26.01
CDY68308 Canola extracellular 28.07 25.67
CDY69775 Canola extracellular, plasma membrane 27.78 25.2
CDY69275 Canola extracellular 27.49 25.13
CDY40923 Canola extracellular, vacuole 28.66 20.9
CDX93759 Canola endoplasmic reticulum, extracellular, vacuole 9.65 20.25
CDY15279 Canola plastid 25.15 20.19
CDY38783 Canola extracellular 23.98 20.0
CDX88024 Canola extracellular, vacuole 34.21 19.93
CDX80361 Canola extracellular, vacuole 34.21 19.93
CDY64876 Canola extracellular, vacuole 33.04 19.38
CDY11623 Canola extracellular 23.39 19.14
CDY16850 Canola plastid 26.61 18.38
CDX93758 Canola plastid 12.87 17.12
Protein Annotations
EnsemblPlants:CDX81023EnsemblPlantsGene:GSBRNA2T00134456001Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPANTHER:PTHR44138
PFAM:PF08263PFAM:PF13855PFscan:PS51450ProteinID:CDX81023ProteinID:CDX81023.1SEG:seg
SignalP:SignalP-noTMSUPFAM:SSF52058UniParc:UPI0004EE12DBMapMan:26.8.3.4::
Description
BnaC03g02770D
Coordinates
chrLK031823:+:1374965..1376079
Molecular Weight (calculated)
38292.2 Da
IEP (calculated)
8.188
GRAVY (calculated)
-0.180
Length
342 amino acids
Sequence
(BLAST)
001: MGKTTTLLLL LFALLFTTSL SKDLCHKDDK NTLLKIKKAM NDPYTIISWD PKDDCCTWVS VECGNANRVT SLDISDDDVS AQIPPEVGDL PYLQYLTLRK
101: LPNLTGEIPP TIAKLKYLKS LWLSWNSLTG PVPEFLSQLK NLEYINLSFN KLSGSIPGSL SLLPKLDFLE LSRNKLTGPI PESFGSFKRA AYGIYLSHNQ
201: LSGSIPKSLG NVDFNTIDLS RNKLEGDASM LFGAKKTTWH IDLSRNMFQF DISKVKVAKT VNFLDLNHNS LTGSIPDQWT QLDLQTFNVS YNRLCGRIPQ
301: GGDLQRFDVY AYLHNKCLCD APLPSCNVKI QATDLYLNLP SK
Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)
001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
Arabidopsis Description
FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.