Factsheet for TraesCS2B01G493300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G470500.1	Wheat	extracellular	93.04	93.86
TraesCS2D01G470400.1	Wheat	extracellular	93.04	93.86
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	68.12	68.71
TraesCS3B01G498900.1	Wheat	extracellular	50.72	51.47
TraesCS1B01G017300.1	Wheat	extracellular	47.54	48.66
TraesCS7B01G103900.1	Wheat	extracellular	46.09	47.18
Os05t0104600-01	Rice	extracellular	46.09	46.9
Os05t0104700-01	Rice	extracellular	49.28	42.39
GSMUA_Achr9P12430_001	Banana	extracellular	37.1	42.38
Bra005918.1-P	Field mustard	extracellular	24.93	41.95
Solyc09g014590.2.1	Tomato	extracellular	37.68	41.67
Bra009237.1-P	Field mustard	extracellular	40.0	41.07
CDX70058	Canola	extracellular	39.42	40.72
CDX98966	Canola	extracellular	39.42	40.72
CDX70057	Canola	extracellular	39.42	40.48
CDX70059	Canola	extracellular	39.13	40.42
Bra009236.1-P	Field mustard	extracellular	39.13	40.42
Bra009234.1-P	Field mustard	extracellular	38.55	40.18
Bra009235.1-P	Field mustard	extracellular	38.84	40.12
Solyc09g014480.1.1	Tomato	extracellular	38.84	40.0
PGSC0003DMT400021883	Potato	extracellular	38.55	39.82
CDX98967	Canola	extracellular	38.55	39.58
CDX70060	Canola	extracellular	37.97	39.46
AT5G06870.1	Thale cress	extracellular	37.68	39.39
AT5G06860.1	Thale cress	extracellular	37.1	38.79
CDX98965	Canola	extracellular	37.1	38.55
CDY58884	Canola	extracellular	36.81	38.37
Bra009238.1-P	Field mustard	extracellular	36.81	38.25
KRG95348	Soybean	mitochondrion	38.84	38.18
Bra005919.1-P	Field mustard	extracellular	36.52	38.07
CDY58887	Canola	extracellular	36.23	37.88
CDX81023	Canola	extracellular	37.39	37.72
TraesCS2B01G226900.1	Wheat	extracellular	36.23	37.43
KRH12977	Soybean	nucleus	36.52	37.17
CDY58888	Canola	extracellular	36.81	37.13
Bra005917.1-P	Field mustard	extracellular	36.81	37.13
VIT_13s0064g01370.t01	Wine grape	extracellular	35.65	37.05
Bra005916.1-P	Field mustard	extracellular	36.81	36.6
CDY58889	Canola	extracellular	35.94	35.73
TraesCS5B01G265900.1	Wheat	extracellular	36.23	35.41
TraesCS2B01G353300.1	Wheat	extracellular	33.62	35.37
KRH12976	Soybean	cytosol	37.39	34.68
TraesCS7B01G094700.1	Wheat	plastid	33.91	33.81
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	36.23	32.47
CDX70056	Canola	extracellular	36.81	31.36
TraesCS7B01G146800.1	Wheat	extracellular	30.72	27.89
TraesCS2B01G590900.1	Wheat	extracellular	29.28	22.6
CDX81022	Canola	extracellular, plasma membrane	30.43	20.75

Protein Annotations

EnsemblPlants:TraesCS2B01G493300.1	EnsemblPlantsGene:TraesCS2B01G493300	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138
PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
TMHMM:TMhelix	MapMan:26.8.3.4	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:690967417..690968454

Molecular Weight (calculated)

36818.3 Da

IEP (calculated)

8.721

GRAVY (calculated)

0.215

Length

345 amino acids

Sequence
(BLAST)

001: MRASSLGRCA NVALAVLLTT IAAAAAAAAA RTKNECHAGD KAALLAIKAG FGNASYFQSW TSDYPCCEWI SVFCDLSASP YTLRRVVAVS FLRDASLVGP
101: LPGASVARLT ALQQLILIHV PGVNGTLPRD LARLSNLNFI DVSYTGISGP VPWFLSRLTK LTYLRLSFNS LTGPIPASLA DVPNLSFLDL GGNRLTGTIP
201: PLLLSRTNDT AYLSLSHNNL TGGVPSDFAA VRFSSLDLSH NALAGEASLL FGLNKSLEKL DLSHNAFSFN LSAVTLPSQL GVFDISHNDV YGVLPSQVAK
301: LQYLNVSYNR LSGRVPIGGN MDRFDQYCFQ HNKGLCGTPL PPCKQ

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.